RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 KRT6BP04259 564 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 ENO1P06733 434 aaKnown RBP11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 ITGAMP11215 1152 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 CREB1P16220 341 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 CPN2P22792 545 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 KRT6CP48668 564 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 SLC13A2Q13183 592 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 EXT1Q16394 746 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 BTBD16Q32M84 506 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 CRB2Q5IJ48 1285 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 CFAP157Q5JU67 520 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 CEP85LQ5SZL2 805 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 FAM219BQ5XKK7 198 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 MRM1Q6IN84 353 aaKnown RBP11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 ISLR2Q6UXK2 745 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 ATG14Q6ZNE5 492 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 FRMD7Q6ZUT3 714 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 GPR180Q86V85 440 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 C10orf107Q8IVU9 208 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 METTL4Q8N3J2 472 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 TCP10LQ8TDR4 215 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 AGAP11Q8TF27 550 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 TM9SF4Q92544 642 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 FAM111AQ96PZ2 611 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 MMP25Q9NPA2 562 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 MID1IP1Q9NPA3 183 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 MS4A12Q9NXJ0 267 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 AHSPQ9NZD4 102 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 SENP1Q9P0U3 644 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 SLC17A7Q9P2U7 560 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 ADAM29Q9UKF5 820 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 FBXW2Q9UKT8 454 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 ASB4Q9Y574 426 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 SPTA1P02549 2419 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 H3BQF6 201 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 PROM1O43490 865 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 SLC28A2O43868 658 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 TYROBPO43914 113 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 TMPRSS11DO60235 418 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 TRIM13O60858 407 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 ULK1O75385 1050 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 FAM58BPP0C7Q3 252 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 HSD3B1P14060 373 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 HSD3B2P26439 372 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 HMOX2P30519 316 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 SOX11P35716 441 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 CASRP41180 1078 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 CD97P48960 835 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 HNRNPH2P55795 449 aaKnown RBP11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 SLC26A5P58743 744 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 ZNF33BQ06732 778 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 MFAP5Q13361 173 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 PCLAFQ15004 111 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 NADK2Q4G0N4 442 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 TNFAIP8L3Q5GJ75 292 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 TCHHL1Q5QJ38 904 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 BEND6Q5SZJ8 279 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 H3F3CQ6NXT2 135 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 LRIG3Q6UXM1 1119 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 PRICKLE2Q7Z3G6 844 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 CLNKQ7Z7G1 428 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 CROCCP2Q86T23 111 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 EXOC3L1Q86VI1 746 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 NUDT13Q86X67 352 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 ZADH2Q8N4Q0 377 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 SIRT6Q8N6T7 355 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 EFCAB3Q8N7B9 438 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 NFAM1Q8NET5 270 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 MFRPQ9BY79 579 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 MRPL1Q9BYD6 325 aaKnown RBP11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 ALOXE3Q9BYJ1 711 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 NMRK1Q9NWW6 199 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 LYARQ9NX58 379 aaKnown RBP11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 PTGFRNQ9P2B2 879 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 PHF11Q9UIL8 331 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 SLC12A4Q9UP95 1085 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 ATG4BQ9Y4P1 393 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 TIMM22Q9Y584 194 aa11.87□□□□□ -0.51
CCDC90B-216ENST00000529856 A0A1W2PR48 441 aa11.86□□□□□ -0.51
CCDC90B-216ENST00000529856 SERTM1A2A2V5 107 aa11.86□□□□□ -0.51
CCDC90B-216ENST00000529856 SYNDIG1LA6NDD5 238 aa11.86□□□□□ -0.51
CCDC90B-216ENST00000529856 SAGE2PA6NJ88 616 aa11.86□□□□□ -0.51
CCDC90B-216ENST00000529856 A8MUA0 341 aa11.86□□□□□ -0.51
CCDC90B-216ENST00000529856 KLK1P06870 262 aa11.86□□□□□ -0.51
CCDC90B-216ENST00000529856 TPP2P29144 1249 aaPredicted RBP11.86□□□□□ -0.51
CCDC90B-216ENST00000529856 ALDH3A1P30838 453 aa11.86□□□□□ -0.51
CCDC90B-216ENST00000529856 TLX1P31314 330 aaPredicted RBP11.86□□□□□ -0.51
CCDC90B-216ENST00000529856 FOXA1P55317 472 aa11.86□□□□□ -0.51
CCDC90B-216ENST00000529856 TNFRSF17Q02223 184 aa11.86□□□□□ -0.51
CCDC90B-216ENST00000529856 TBL3Q12788 808 aaKnown RBP11.86□□□□□ -0.51
CCDC90B-216ENST00000529856 ASPHQ12797 758 aa11.86□□□□□ -0.51
CCDC90B-216ENST00000529856 STX4Q12846 297 aa11.86□□□□□ -0.51
CCDC90B-216ENST00000529856 CSTF3Q12996 717 aaKnown RBP11.86□□□□□ -0.51
CCDC90B-216ENST00000529856 PLEKHN1Q494U1 663 aaPredicted RBP11.86□□□□□ -0.51
CCDC90B-216ENST00000529856 COLEC12Q5KU26 742 aa11.86□□□□□ -0.51
CCDC90B-216ENST00000529856 B3GNTL1Q67FW5 361 aaPredicted RBP11.86□□□□□ -0.51
CCDC90B-216ENST00000529856 C18orf63Q68DL7 685 aa11.86□□□□□ -0.51
CCDC90B-216ENST00000529856 SLC6A19Q695T7 634 aa11.86□□□□□ -0.51
CCDC90B-216ENST00000529856 CYP20A1Q6UW02 462 aa11.86□□□□□ -0.51
CCDC90B-216ENST00000529856 LINC00696Q6ZRV3 163 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms