RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 TVP23BQ9NYZ1 205 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 PRDM4Q9UKN5 801 aa14.4□□□□□ -0.1
USP47-207ENST00000527733 PPIEQ9UNP9 301 aaKnown RBP14.4□□□□□ -0.1
USP47-207ENST00000527733 LINGO3P0C6S8 592 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 CXCR1P25024 350 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 DPP6P42658 865 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 CSNK2BP67870 215 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 ACY1Q03154 408 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 DPTQ07507 201 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 GPR107Q5VW38 600 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 ASTLQ6HA08 431 aaPredicted RBP14.39□□□□□ -0.11
USP47-207ENST00000527733 B3GNT6Q6ZMB0 384 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 PHOSPHO1Q8TCT1 267 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 DUSP23Q9BVJ7 150 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 IFT27Q9BW83 186 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 EHD1Q9H4M9 534 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 POFUT2Q9Y2G5 429 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 HS3ST3A1Q9Y663 406 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 TCEA1P23193 301 aaKnown RBP14.39□□□□□ -0.11
USP47-207ENST00000527733 ACSL1P33121 698 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 CSNK1EP49674 416 aaKnown RBP14.39□□□□□ -0.11
USP47-207ENST00000527733 ARSFP54793 590 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 TAS2R38P59533 333 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 ARMCX4Q5H9R4 360 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 SPANXN2Q5MJ10 180 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 TMEM107Q6UX40 140 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 TMPRSS11AQ6ZMR5 421 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.39□□□□□ -0.11
USP47-207ENST00000527733 OR4N5Q8IXE1 308 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 OR52E4Q8NGH9 312 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 NR4A3Q92570 626 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 C20orf27Q9GZN8 174 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 EPB41L1Q9H4G0 881 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 IFT52Q9Y366 437 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 CASP8AP2Q9UKL3 1982 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 C5orf67F2Z3F1 127 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 LSM3P62310 102 aaKnown RBP14.39□□□□□ -0.11
USP47-207ENST00000527733 TRIM16LQ309B1 348 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 NUP54Q7Z3B4 507 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 VRK3Q8IV63 474 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 MCEMP1Q8IX19 187 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 OR2L8Q8NGY9 312 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 GRHL3Q8TE85 626 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 GAL3ST3Q96A11 431 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 SLC45A3Q96JT2 553 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 SERINC2Q96SA4 455 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 SERINC1Q9NRX5 453 aa14.39□□□□□ -0.11
USP47-207ENST00000527733 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.39□□□□□ -0.11
USP47-207ENST00000527733 GEMIN8Q9NWZ8 242 aaKnown RBP14.39□□□□□ -0.11
USP47-207ENST00000527733 GPR37L1O60883 481 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 FADS2O95864 444 aaKnown RBP14.38□□□□□ -0.11
USP47-207ENST00000527733 HSD17B1P14061 328 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 GPX3P22352 226 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 GABRA3P34903 492 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 OR4D2P58180 307 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 KRR1Q13601 381 aaKnown RBP14.38□□□□□ -0.11
USP47-207ENST00000527733 MYBPC3Q14896 1274 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.38□□□□□ -0.11
USP47-207ENST00000527733 RNF168Q8IYW5 571 aaPredicted RBP14.38□□□□□ -0.11
USP47-207ENST00000527733 SYNPOQ8N3V7 929 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 SLC44A3Q8N4M1 653 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 UBTD2Q8WUN7 234 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 ZHX1-C8orf76Q96EF9 292 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 PEX11GQ96HA9 241 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 NODALQ96S42 347 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 ANKRD12Q6UB98 2062 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 TOR1BO14657 336 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 HMGN1P05114 100 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 OPRD1P41143 372 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 SMARCD3Q6STE5 483 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 C19orf43Q9BQ61 176 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 GPR45Q9Y5Y3 372 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 TTC3P53804 2025 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 C2CD4DB7Z1M9 353 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 PCDHGA12O60330 932 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 PSIP1O75475 530 aaKnown RBP14.38□□□□□ -0.11
USP47-207ENST00000527733 ZBTB11O95625 1053 aaPredicted RBP14.38□□□□□ -0.11
USP47-207ENST00000527733 CHRM5P08912 532 aaPredicted RBP14.38□□□□□ -0.11
USP47-207ENST00000527733 PSMB5P28074 263 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 HK3P52790 923 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 TMEM44Q2T9K0 475 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 ZNF683Q8IZ20 524 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 LSMEM2Q8N112 164 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 ZNF354BQ96LW1 612 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 ALPK1Q96QP1 1244 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 OR51I1Q9H343 314 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 SDHAF3Q9NRP4 125 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 ACSL6Q9UKU0 697 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 HYKKA2RU49 373 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 KIF1CO43896 1103 aaKnown RBP14.38□□□□□ -0.11
USP47-207ENST00000527733 VNN2O95498 520 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 GGTA1PQ4G0N0 100 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 FLYWCH1Q4VC44 716 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 RBM44Q6ZP01 1051 aaKnown RBP14.38□□□□□ -0.11
USP47-207ENST00000527733 OAFQ86UD1 273 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 OR8H2Q8N162 312 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 OR52N2Q8NGI0 321 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 ZNF671Q8TAW3 534 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 GFM1Q96RP9 751 aaKnown RBP14.38□□□□□ -0.11
USP47-207ENST00000527733 CCM2LQ9NUG4 571 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms