RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 NEK2P51955 445 aa24.64■■□□□ 1.54
TSPAN4-217ENST00000527644 TRAF3Q13114 568 aa24.64■■□□□ 1.54
TSPAN4-217ENST00000527644 SLAMF1Q13291 335 aa24.64■■□□□ 1.54
TSPAN4-217ENST00000527644 NR6A1Q15406 480 aa24.64■■□□□ 1.54
TSPAN4-217ENST00000527644 GGTA1PQ4G0N0 100 aa24.64■■□□□ 1.54
TSPAN4-217ENST00000527644 RPS19BP1Q86WX3 136 aaKnown RBP24.64■■□□□ 1.54
TSPAN4-217ENST00000527644 KIF2BQ8N4N8 673 aa24.64■■□□□ 1.54
TSPAN4-217ENST00000527644 FAM26EQ8N5C1 309 aa24.64■■□□□ 1.54
TSPAN4-217ENST00000527644 C7orf57Q8NEG2 295 aa24.64■■□□□ 1.54
TSPAN4-217ENST00000527644 B3GNT7Q8NFL0 401 aa24.64■■□□□ 1.54
TSPAN4-217ENST00000527644 SORBS1Q9BX66 1292 aaKnown RBP24.64■■□□□ 1.54
TSPAN4-217ENST00000527644 CDCP1Q9H5V8 836 aa24.64■■□□□ 1.54
TSPAN4-217ENST00000527644 ANKZF1Q9H8Y5 726 aa24.64■■□□□ 1.54
TSPAN4-217ENST00000527644 ADAP2Q9NPF8 381 aa24.64■■□□□ 1.54
TSPAN4-217ENST00000527644 FBXW2Q9UKT8 454 aa24.64■■□□□ 1.54
TSPAN4-217ENST00000527644 PPIEQ9UNP9 301 aaKnown RBP24.64■■□□□ 1.54
TSPAN4-217ENST00000527644 GOLGA8RI6L899 631 aa24.63■■□□□ 1.53
TSPAN4-217ENST00000527644 PRAMEF2O60811 474 aa24.63■■□□□ 1.53
TSPAN4-217ENST00000527644 OTCP00480 354 aa24.63■■□□□ 1.53
TSPAN4-217ENST00000527644 SHBGP04278 402 aa24.63■■□□□ 1.53
TSPAN4-217ENST00000527644 HERVK_113P63132 956 aa24.63■■□□□ 1.53
TSPAN4-217ENST00000527644 STX4Q12846 297 aa24.63■■□□□ 1.53
TSPAN4-217ENST00000527644 MRPL49Q13405 166 aaKnown RBP24.63■■□□□ 1.53
TSPAN4-217ENST00000527644 FRG2Q64ET8 278 aa24.63■■□□□ 1.53
TSPAN4-217ENST00000527644 FAM180AQ6UWF9 173 aa24.63■■□□□ 1.53
TSPAN4-217ENST00000527644 FAR1Q8WVX9 515 aa24.63■■□□□ 1.53
TSPAN4-217ENST00000527644 FRG2BQ96QU4 278 aa24.63■■□□□ 1.53
TSPAN4-217ENST00000527644 UTP23Q9BRU9 249 aaKnown RBP24.63■■□□□ 1.53
TSPAN4-217ENST00000527644 ERVK-6Q9BXR3 956 aa24.63■■□□□ 1.53
TSPAN4-217ENST00000527644 ALOXE3Q9BYJ1 711 aa24.63■■□□□ 1.53
TSPAN4-217ENST00000527644 DEFB126Q9BYW3 111 aa24.63■■□□□ 1.53
TSPAN4-217ENST00000527644 DCDC2Q9UHG0 476 aa24.63■■□□□ 1.53
TSPAN4-217ENST00000527644 MAN1A2O60476 641 aa24.62■■□□□ 1.53
TSPAN4-217ENST00000527644 PPP2R1BP30154 601 aa24.62■■□□□ 1.53
TSPAN4-217ENST00000527644 CLCN2P51788 898 aa24.62■■□□□ 1.53
TSPAN4-217ENST00000527644 SRSF1Q07955 248 aaKnown RBP eCLIP24.62■■□□□ 1.53
TSPAN4-217ENST00000527644 TUBA3CQ13748 450 aa24.62■■□□□ 1.53
TSPAN4-217ENST00000527644 SERTAD2Q14140 314 aa24.62■■□□□ 1.53
TSPAN4-217ENST00000527644 ELAVL1Q15717 326 aaKnown RBP24.62■■□□□ 1.53
TSPAN4-217ENST00000527644 TTC19Q6DKK2 380 aaPredicted RBP24.62■■□□□ 1.53
TSPAN4-217ENST00000527644 TUBA3EQ6PEY2 450 aa24.62■■□□□ 1.53
TSPAN4-217ENST00000527644 GPR180Q86V85 440 aa24.62■■□□□ 1.53
TSPAN4-217ENST00000527644 TDRPQ86YL5 185 aa24.62■■□□□ 1.53
TSPAN4-217ENST00000527644 TMEM132CQ8N3T6 1108 aa24.62■■□□□ 1.53
TSPAN4-217ENST00000527644 BCORP1Q8N888 145 aa24.62■■□□□ 1.53
TSPAN4-217ENST00000527644 APCDD1LQ8NCL9 501 aa24.62■■□□□ 1.53
TSPAN4-217ENST00000527644 OR4F6Q8NGB9 312 aa24.62■■□□□ 1.53
TSPAN4-217ENST00000527644 MTFMTQ96DP5 389 aaKnown RBP24.62■■□□□ 1.53
TSPAN4-217ENST00000527644 SERPINI1Q99574 410 aa24.62■■□□□ 1.53
TSPAN4-217ENST00000527644 ZNF717Q9BY31 904 aaPredicted RBP24.62■■□□□ 1.53
TSPAN4-217ENST00000527644 VTI1BQ9UEU0 232 aa24.62■■□□□ 1.53
TSPAN4-217ENST00000527644 PHF11Q9UIL8 331 aa24.62■■□□□ 1.53
TSPAN4-217ENST00000527644 GABRR3A8MPY1 467 aa24.61■■□□□ 1.53
TSPAN4-217ENST00000527644 ZNF500O60304 480 aaPredicted RBP24.61■■□□□ 1.53
TSPAN4-217ENST00000527644 DLX3O60479 287 aa24.61■■□□□ 1.53
TSPAN4-217ENST00000527644 ETHE1O95571 254 aa24.61■■□□□ 1.53
TSPAN4-217ENST00000527644 IFNA16P05015 189 aa24.61■■□□□ 1.53
TSPAN4-217ENST00000527644 ATP5F1P24539 256 aaPredicted RBP24.61■■□□□ 1.53
TSPAN4-217ENST00000527644 CD96P40200 585 aa24.61■■□□□ 1.53
TSPAN4-217ENST00000527644 GPR143P51810 404 aa24.61■■□□□ 1.53
TSPAN4-217ENST00000527644 CDH13P55290 713 aa24.61■■□□□ 1.53
TSPAN4-217ENST00000527644 IFT88Q13099 833 aa24.61■■□□□ 1.53
TSPAN4-217ENST00000527644 FHL5Q5TD97 284 aa24.61■■□□□ 1.53
TSPAN4-217ENST00000527644 RPS27LQ71UM5 84 aaKnown RBP24.61■■□□□ 1.53
TSPAN4-217ENST00000527644 MYRIPQ8NFW9 859 aa24.61■■□□□ 1.53
TSPAN4-217ENST00000527644 VMP1Q96GC9 406 aa24.61■■□□□ 1.53
TSPAN4-217ENST00000527644 DDX31Q9H8H2 851 aaKnown RBP24.61■■□□□ 1.53
TSPAN4-217ENST00000527644 PCDHGB6Q9Y5F9 930 aa24.61■■□□□ 1.53
TSPAN4-217ENST00000527644 A0A1W2PPM1 405 aa24.6■■□□□ 1.53
TSPAN4-217ENST00000527644 ANKUB1A6NFN9 424 aa24.6■■□□□ 1.53
TSPAN4-217ENST00000527644 LDB3O75112 727 aa24.6■■□□□ 1.53
TSPAN4-217ENST00000527644 SEMA3DO95025 777 aa24.6■■□□□ 1.53
TSPAN4-217ENST00000527644 TLX1P31314 330 aaPredicted RBP24.6■■□□□ 1.53
TSPAN4-217ENST00000527644 BSGP35613 385 aa24.6■■□□□ 1.53
TSPAN4-217ENST00000527644 HSD17B3P37058 310 aa24.6■■□□□ 1.53
TSPAN4-217ENST00000527644 MLF1P58340 268 aa24.6■■□□□ 1.53
TSPAN4-217ENST00000527644 CLCQ05315 142 aa24.6■■□□□ 1.53
TSPAN4-217ENST00000527644 ELOAQ14241 798 aaKnown RBP24.6■■□□□ 1.53
TSPAN4-217ENST00000527644 RASA2Q15283 850 aa24.6■■□□□ 1.53
TSPAN4-217ENST00000527644 EIF2S3LQ2VIR3 472 aaKnown RBP24.6■■□□□ 1.53
TSPAN4-217ENST00000527644 ZNF766Q5HY98 468 aa24.6■■□□□ 1.53
TSPAN4-217ENST00000527644 ZNF678Q5SXM1 525 aa24.6■■□□□ 1.53
TSPAN4-217ENST00000527644 SLC22A9Q8IVM8 553 aa24.6■■□□□ 1.53
TSPAN4-217ENST00000527644 ARMC10Q8N2F6 343 aa24.6■■□□□ 1.53
TSPAN4-217ENST00000527644 ST6GALNAC3Q8NDV1 305 aa24.6■■□□□ 1.53
TSPAN4-217ENST00000527644 DAZLQ92904 295 aaKnown RBP24.6■■□□□ 1.53
TSPAN4-217ENST00000527644 ELOVL6Q9H5J4 265 aa24.6■■□□□ 1.53
TSPAN4-217ENST00000527644 RPF2Q9H7B2 306 aaKnown RBP24.6■■□□□ 1.53
TSPAN4-217ENST00000527644 LYARQ9NX58 379 aaKnown RBP24.6■■□□□ 1.53
TSPAN4-217ENST00000527644 CLCA3PQ9Y6N3 262 aa24.6■■□□□ 1.53
TSPAN4-217ENST00000527644 A0A0A6YYD5 115 aa24.59■■□□□ 1.53
TSPAN4-217ENST00000527644 TRBV11-1A0A0K0K1C0 115 aa24.59■■□□□ 1.53
TSPAN4-217ENST00000527644 PPP6CO00743 305 aa24.59■■□□□ 1.53
TSPAN4-217ENST00000527644 EEDO75530 441 aaKnown RBP24.59■■□□□ 1.53
TSPAN4-217ENST00000527644 SUPT7LO94864 414 aa24.59■■□□□ 1.53
TSPAN4-217ENST00000527644 RASAL1O95294 804 aa24.59■■□□□ 1.53
TSPAN4-217ENST00000527644 IMPDH1P20839 514 aa24.59■■□□□ 1.53
TSPAN4-217ENST00000527644 SLCO1A2P46721 670 aa24.59■■□□□ 1.53
TSPAN4-217ENST00000527644 BIKQ13323 160 aa24.59■■□□□ 1.53
TSPAN4-217ENST00000527644 OR1C1Q15619 314 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms