RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 GOSR1O95249 250 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 CELF2O95319 508 aaKnown RBP3.26□□□□□ -1.89
CD44-217ENST00000525348 KRT14P02533 472 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 RETP07949 1114 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 ZFYP08048 801 aaPredicted RBP3.26□□□□□ -1.89
CD44-217ENST00000525348 CCDC166P0CW27 439 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 POU2F1P14859 743 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 PDGFRAP16234 1089 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 EPCAMP16422 314 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 CTRB1P17538 263 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 CETN2P41208 172 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 LMAN1P49257 510 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 IRX4P78413 519 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 MS4A2Q01362 244 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 UBXN1Q04323 297 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 KDSRQ06136 332 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 RASGEF1BQ0VAM2 473 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 TRA2AQ13595 282 aaKnown RBP eCLIP3.26□□□□□ -1.89
CD44-217ENST00000525348 IDI1Q13907 227 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 PTPRCAPQ14761 206 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 TAB1Q15750 504 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 CCDC153Q494R4 210 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 CEP55Q53EZ4 464 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 TEX35Q5T0J7 233 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 CTRB2Q6GPI1 263 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 PM20D1Q6GTS8 502 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 C8orf74Q6P047 294 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 ZBTB49Q6ZSB9 765 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 CCDC121Q6ZUS5 278 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 NLRP9Q7RTR0 991 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 BNIPLQ7Z465 357 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 WDR49Q8IV35 697 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 ANKRD13CQ8N6S4 541 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 SLC4A11Q8NBS3 891 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 LILRB4Q8NHJ6 448 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 ATP8B4Q8TF62 1192 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 PIK3R3Q92569 461 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 ARL5BQ96KC2 179 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 AGAP4Q96P64 663 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 CIB1Q99828 191 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 C19orf43Q9BQ61 176 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 ERP44Q9BS26 406 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 NTMT1Q9BV86 223 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 DCTPP1Q9H773 170 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 UCK1Q9HA47 277 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 C12orf10Q9HB07 376 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 NDE1Q9NXR1 346 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 ATXN10Q9UBB4 475 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 MTRRQ9UBK8 725 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 MTRF1LQ9UGC7 380 aaKnown RBP3.26□□□□□ -1.89
CD44-217ENST00000525348 TMCO1Q9UM00 188 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 DDX19BQ9UMR2 479 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 CHKBQ9Y259 395 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 C15orf41Q9Y2V0 281 aa3.26□□□□□ -1.89
CD44-217ENST00000525348 UHRF1BP1LA0JNW5 1464 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 TRBV4-1A0A0J9YWV2 114 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 A0A1B0GWJ7 208 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 TRBC2A0A5B9 178 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 NPIPB9F8W1W9 429 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 GOLGA8MH3BSY2 632 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 UBXN8O00124 270 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 LIN7AO14910 233 aaPredicted RBP3.25□□□□□ -1.89
CD44-217ENST00000525348 CLN5O75503 358 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 KRT33AO76009 404 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 TRIM16O95361 564 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 ASGR1P07306 291 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 HEXBP07686 556 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 DLATP10515 647 aaKnown RBP3.25□□□□□ -1.89
CD44-217ENST00000525348 S100A1P23297 94 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 CFL1P23528 166 aaKnown RBP3.25□□□□□ -1.89
CD44-217ENST00000525348 PCGF2P35227 344 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 CCT6AP40227 531 aaKnown RBP3.25□□□□□ -1.89
CD44-217ENST00000525348 TSFMP43897 325 aaKnown RBP3.25□□□□□ -1.89
CD44-217ENST00000525348 MTIF2P46199 727 aaKnown RBP3.25□□□□□ -1.89
CD44-217ENST00000525348 OR1G1P47890 313 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 OR3A2P47893 321 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 SULT1E1P49888 294 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 ASCL1P50553 236 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 BLVRAP53004 296 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 YBEYP58557 167 aaPredicted RBP3.25□□□□□ -1.89
CD44-217ENST00000525348 RPP38P78345 283 aaKnown RBP3.25□□□□□ -1.89
CD44-217ENST00000525348 MRPS15P82914 257 aaKnown RBP3.25□□□□□ -1.89
CD44-217ENST00000525348 MYL7Q01449 175 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 ACSM1Q08AH1 577 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 CETN1Q12798 172 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 RALGDSQ12967 914 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 SCARB2Q14108 478 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 CCDC57Q2TAC2 916 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 ERMARDQ5T6L9 678 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 ALKBH5Q6P6C2 394 aaKnown RBP3.25□□□□□ -1.89
CD44-217ENST00000525348 CLEC2AQ6UVW9 174 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 C6orf89Q6UWU4 347 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 PPP1R21Q6ZMI0 780 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 GDPGP1Q6ZNW5 385 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 C3orf62Q6ZUJ4 267 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 GPR142Q7Z601 462 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 POGLUT1Q8NBL1 392 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 C17orf47Q8NEP4 570 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 OR52K1Q8NGK4 314 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms