RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	CFAP54	Q96N23	3096 aa		4.01	□□□□□ -1.77
PCM1-223	ENST00000524356	SPEF2	Q9C093	1822 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	EMSY	Q7Z589	1322 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	RIF1	Q5UIP0	2472 aa	Known RBP	4	□□□□□ -1.77
PCM1-223	ENST00000524356		A0A1B0GUL7	405 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356		A0A1W2PPK0	400 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356		A0A1W2PPW3	197 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	ILVBL	A1L0T0	632 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	GOLGA8O	A6NCC3	632 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	GOLGA8N	F8WBI6	632 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356		M0QZ24	198 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	SLC28A1	O00337	649 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	ANKRD28	O15084	1053 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	MAPK13	O15264	365 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	TBX19	O60806	448 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	CSDE1	O75534	798 aa	Known RBP	4	□□□□□ -1.77
PCM1-223	ENST00000524356	MT-CO3	P00414	261 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	ASNS	P08243	561 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	MYZAP	P0CAP1	466 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	PIK3R1	P27986	724 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	CCT6A	P40227	531 aa	Known RBP	4	□□□□□ -1.77
PCM1-223	ENST00000524356	OR3A1	P47881	315 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	PGGT1B	P53609	377 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	MAPK12	P53778	367 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	GAS1	P54826	345 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	HADHB	P55084	474 aa	Known RBP	4	□□□□□ -1.77
PCM1-223	ENST00000524356	SNRPE	P62304	92 aa	Known RBP	4	□□□□□ -1.77
PCM1-223	ENST00000524356	PRKAA1	Q13131	559 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	MVP	Q14764	893 aa	Known RBP	4	□□□□□ -1.77
PCM1-223	ENST00000524356	ARHGAP19	Q14CB8	494 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	MEP1A	Q16819	746 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	PFKFB3	Q16875	520 aa	Predicted RBP	4	□□□□□ -1.77
PCM1-223	ENST00000524356	CTU2	Q2VPK5	515 aa	Known RBP	4	□□□□□ -1.77
PCM1-223	ENST00000524356	LACTB2	Q53H82	288 aa	Predicted RBP	4	□□□□□ -1.77
PCM1-223	ENST00000524356	TMEM31	Q5JXX7	168 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	NCR3LG1	Q68D85	454 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	ERAS	Q7Z444	233 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	TMEM126B	Q8IUX1	230 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	CENPL	Q8N0S6	344 aa	Predicted RBP	4	□□□□□ -1.77
PCM1-223	ENST00000524356	CCDC63	Q8NA47	563 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	MCPH1	Q8NEM0	835 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	GPRC5A	Q8NFJ5	357 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	OR4A16	Q8NH70	328 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	OIT3	Q8WWZ8	545 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	DNAAF4	Q8WXU2	420 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4	□□□□□ -1.77
PCM1-223	ENST00000524356	ERGIC1	Q969X5	290 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	STAMBPL1	Q96FJ0	436 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	MAGED4	Q96JG8	741 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	RPGRIP1	Q96KN7	1286 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	SFXN2	Q96NB2	322 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	LRFN5	Q96NI6	719 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	OR6C1	Q96RD1	312 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	GPA33	Q99795	319 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	IDI2	Q9BXS1	227 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	SLC39A8	Q9C0K1	460 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	TMEM231	Q9H6L2	316 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	MVB12B	Q9H7P6	319 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	CATSPERB	Q9H7T0	1116 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	ACTR5	Q9H9F9	607 aa	Predicted RBP	4	□□□□□ -1.77
PCM1-223	ENST00000524356	HINT3	Q9NQE9	182 aa	Known RBP	4	□□□□□ -1.77
PCM1-223	ENST00000524356	OSER1	Q9NX31	292 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	CISD1	Q9NZ45	108 aa	Known RBP	4	□□□□□ -1.77
PCM1-223	ENST00000524356	PLEKHB1	Q9UF11	243 aa	Predicted RBP	4	□□□□□ -1.77
PCM1-223	ENST00000524356	ICAM5	Q9UMF0	924 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	MGAT4B	Q9UQ53	548 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	STON1	Q9Y6Q2	735 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	SMCHD1	A6NHR9	2005 aa		4	□□□□□ -1.77
PCM1-223	ENST00000524356	PHLPP2	Q6ZVD8	1323 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356		A0A087X0K7	114 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356		A0A096LPK6	155 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	FAM149A	A5PLN7	773 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	EIF4E1B	A6NMX2	242 aa	Known RBP	3.99	□□□□□ -1.77
PCM1-223	ENST00000524356		E9PI62	339 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	PRRG1	O14668	218 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	RRH	O14718	337 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	SSX4	O60224	188 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	CS	O75390	466 aa	Known RBP	3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	FRAT2	O75474	233 aa	Predicted RBP	3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	ECI2	O75521	394 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	CTAG2	O75638	210 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	RAD51D	O75771	328 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	FLOT1	O75955	427 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	NEURL1	O76050	574 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	RGS11	O94810	467 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	TMCC1	O94876	653 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	KDM4B	O94953	1096 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	GSR	P00390	522 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	PGK1	P00558	417 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	NPPA	P01160	153 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	UGT2B4	P06133	528 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	YES1	P07947	543 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	OR2T7	P0C7T2	308 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	RALA	P11233	206 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	CYBA	P13498	195 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	AKR1A1	P14550	325 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	ATP6V1C1	P21283	382 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	HOXA7	P31268	230 aa	Predicted RBP	3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	CAPG	P40121	348 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	COMP	P49747	757 aa	Predicted RBP	3.99	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms