RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 TM9SF3Q9HD45 589 aa15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 SH3PXD2BA1X283 911 aa15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 ZNF821O75541 412 aaPredicted RBP15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 CH25HO95992 272 aa15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 HOXC13P31276 330 aa15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 DOC2AQ14183 400 aa15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 UTS2BQ765I0 119 aa15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 ZNF440Q8IYI8 595 aa15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 THAP3Q8WTV1 239 aaPredicted RBP15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 HLA-CQ95604 372 aa15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 FBRSL1Q9HCM7 1045 aaKnown RBP15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 LAMP5Q9UJQ1 280 aa15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 OR14I1A6ND48 311 aa15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 ZNF878C9JN71 531 aa15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 ACOX3O15254 700 aa15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 HLA-DPB1P04440 258 aa15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 HTR1AP08908 422 aa15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 GLDCP23378 1020 aa15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 TECRLQ5HYJ1 363 aa15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 C1orf94Q6P1W5 598 aa15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 TMEM135Q86UB9 458 aa15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 CLIP4Q8N3C7 705 aa15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 CHST14Q8NCH0 376 aa15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 BMFQ96LC9 184 aa15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 CPEB1Q9BZB8 566 aaKnown RBP15.6■□□□□ 0.09
PCDHA3-201ENST00000522353 PRAMEF33A0A0G2JMD5 474 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 EIF1AYO14602 144 aaKnown RBP15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 PRAMEF10O60809 474 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 RHDQ02161 417 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 NSDHLQ15738 373 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 MANEALQ5VSG8 457 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 OR2L8Q8NGY9 312 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 GNPDA2Q8TDQ7 276 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 NXPE2Q96DL1 559 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 OR1F2PQ96R84 312 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 F2RL3Q96RI0 385 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 PDLIM7Q9NR12 457 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 TLX2O43763 284 aaPredicted RBP15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 ITGB1P05556 798 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 CEBPBP17676 345 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 OTX2P32243 289 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 GPR143P51810 404 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 LRP8Q14114 963 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 KCTD18Q6PI47 426 aaPredicted RBP15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 CRTC1Q6UUV9 634 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 CPXM2Q8N436 756 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 MFSD2AQ8NA29 543 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 CASD1Q96PB1 797 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 PCDH10Q9P2E7 1040 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 CYTH4Q9UIA0 394 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 ENTPD6O75354 484 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 LPAL2Q16609 132 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 ABHD17BQ5VST6 288 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 RAET1LQ5VY80 246 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 ULK3Q6PHR2 472 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 MARCH9Q86YJ5 346 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 TTC9BQ8N6N2 239 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 MND1Q9BWT6 205 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 VILLO15195 856 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 PDYNP01213 254 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 ITGB7P26010 798 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 NIPAL4Q0D2K0 466 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 MADCAM1Q13477 382 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 FGL2Q14314 439 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 CHRDL2Q6WN34 429 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 ZNF100Q8IYN0 542 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 ZNF548Q8NEK5 533 aaPredicted RBP15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 HSPBAP1Q96EW2 488 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 KCNK13Q9HB14 408 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 A0A096LPI6 279 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 J3QLW9 94 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 HSPA12AO43301 675 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 TBX10O75333 385 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 ZNF19P17023 458 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 EIF5AP63241 154 aaKnown RBP15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 ZNF234Q14588 700 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 RPL13AP3Q6NVV1 102 aa15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 WDR77Q9BQA1 342 aaPredicted RBP15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 PHRF1Q9P1Y6 1649 aaKnown RBP15.59■□□□□ 0.09
PCDHA3-201ENST00000522353 FAM227AF5H4B4 570 aa15.58■□□□□ 0.09
PCDHA3-201ENST00000522353 SCGNO76038 276 aa15.58■□□□□ 0.09
PCDHA3-201ENST00000522353 CYS1Q717R9 158 aa15.58■□□□□ 0.09
PCDHA3-201ENST00000522353 ERMP1Q7Z2K6 904 aa15.58■□□□□ 0.09
PCDHA3-201ENST00000522353 ZNF283Q8N7M2 679 aa15.58■□□□□ 0.09
PCDHA3-201ENST00000522353 GATSQ8NAP1 163 aa15.58■□□□□ 0.09
PCDHA3-201ENST00000522353 ACVR1CQ8NER5 493 aa15.58■□□□□ 0.09
PCDHA3-201ENST00000522353 CCDC107Q8WV48 283 aa15.58■□□□□ 0.09
PCDHA3-201ENST00000522353 PMM1Q92871 262 aa15.58■□□□□ 0.09
PCDHA3-201ENST00000522353 POU2F3Q9UKI9 436 aa15.58■□□□□ 0.09
PCDHA3-201ENST00000522353 OR12D1P0DN82 309 aa15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 NFE2L1Q14494 772 aa15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 ATG9BQ674R7 924 aa15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 CBARPQ8N350 705 aaPredicted RBP15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 TESCQ96BS2 214 aa15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 TMEM74Q96NL1 305 aa15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 MNTQ99583 582 aa15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 ZFYVE21Q9BQ24 234 aa15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 A0A1W2PPL8 197 aa15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 RAB15P59190 212 aa15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 DSG2Q14126 1118 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 261.3 ms