RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 EXO1Q9UQ84 846 aaKnown RBP12.36□□□□□ -0.43
CPNE3-205ENST00000522240 NAALAD2Q9Y3Q0 740 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 SPACA6W5XKT8 324 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 CFAP47Q6ZTR5 3102 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 LOC100653049A0A140TA62 436 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 C1orf226A1L170 272 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 DCDC2BA2VCK2 349 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 B4E171 279 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 C9JVG2 144 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 MRASO14807 208 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 DSCR3O14972 297 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 AKAP10O43572 662 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 FOXS1O43638 330 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 KRT34O76011 436 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 MED26O95402 600 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 AIFM1O95831 613 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 B3GALT4O96024 378 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 NR2F6P10588 404 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 FGF5P12034 268 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 CD1EP15812 388 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 S100A3P33764 101 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 TSPAN7P41732 249 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 HNRNPFP52597 415 aaKnown RBP12.35□□□□□ -0.43
CPNE3-205ENST00000522240 NCALDP61601 193 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 IL11RAQ14626 422 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 MMEL1Q495T6 779 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 NDUFAF5Q5TEU4 345 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 PRMT9Q6P2P2 845 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 HACD2Q6Y1H2 254 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 DPP10Q8N608 796 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 BMPERQ8N8U9 685 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 PCYOX1LQ8NBM8 494 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 DEFB124Q8NES8 71 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 DNAJB8Q8NHS0 232 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 GFM2Q969S9 779 aaKnown RBP12.35□□□□□ -0.43
CPNE3-205ENST00000522240 PPCDCQ96CD2 204 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 RCN3Q96D15 328 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 COQ8BQ96D53 544 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 DEPDC7Q96QD5 511 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 OR6C1Q96RD1 312 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 MAPKAP1Q9BPZ7 522 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 NDC1Q9BTX1 674 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 C1orf21Q9H246 121 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 WDR41Q9HAD4 459 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 EFCAB1Q9HAE3 211 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 NDE1Q9NXR1 346 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 FBXW2Q9UKT8 454 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 CDC14AQ9UNH5 594 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 ATG4BQ9Y4P1 393 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 PCDHB3Q9Y5E6 796 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 PCDHA9Q9Y5H5 950 aa12.35□□□□□ -0.43
CPNE3-205ENST00000522240 A0A1B0GX78 115 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 BLACEA4D250 179 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 ASPDHA6ND91 283 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 ZNF860A6NHJ4 632 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 EFCAB7A8K855 629 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 GABRR3A8MPY1 467 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 FBP2O00757 339 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 ZNF749O43361 778 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 PROM1O43490 865 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 RDH16O75452 317 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 PIM1P11309 404 aaPredicted RBP12.34□□□□□ -0.43
CPNE3-205ENST00000522240 PTPN4P29074 926 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 CPA2P48052 419 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 NUDT2P50583 147 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 DGKQP52824 942 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 LIM2P55344 173 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 RAB38P57729 211 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 MC2RQ01718 297 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 RUNX2Q13950 521 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 TLR1Q15399 786 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 TRMT5Q32P41 509 aaKnown RBP12.34□□□□□ -0.43
CPNE3-205ENST00000522240 VPS26BQ4G0F5 336 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.34□□□□□ -0.43
CPNE3-205ENST00000522240 CPTPQ5TA50 214 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 ANXA8L1Q5VT79 327 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 OR52E8Q6IFG1 317 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 RHBDD2Q6NTF9 364 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 PPP1R3BQ86XI6 285 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 TICAM1Q8IUC6 712 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 CA13Q8N1Q1 262 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 OR7A2PQ8NGA2 310 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 OR9A4Q8NGU2 314 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 VPS33AQ96AX1 596 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 ROPN1LQ96C74 230 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 SLC7A6OSQ96CW6 309 aaPredicted RBP12.34□□□□□ -0.43
CPNE3-205ENST00000522240 CMKLR1Q99788 373 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 DUSP26Q9BV47 211 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 LRMDAQ9H2I8 198 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 RMND5AQ9H871 391 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 ACTR5Q9H9F9 607 aaPredicted RBP12.34□□□□□ -0.43
CPNE3-205ENST00000522240 FBXO8Q9NRD0 319 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.34□□□□□ -0.43
CPNE3-205ENST00000522240 TAS2R7Q9NYW3 318 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 KCMF1Q9P0J7 381 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 MAN2B2Q9Y2E5 1009 aa12.34□□□□□ -0.43
CPNE3-205ENST00000522240 FAM208BQ5VWN6 2430 aa12.33□□□□□ -0.43
CPNE3-205ENST00000522240 A0A0A6YYC8 382 aaPredicted RBP12.33□□□□□ -0.44
CPNE3-205ENST00000522240 A0A1W2PR48 441 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 I3L1I5 382 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms