RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 APCDD1LQ8NCL9 501 aa16.7■□□□□ 0.26
TRAPPC9-211ENST00000521700 ST6GALNAC3Q8NDV1 305 aa16.7■□□□□ 0.26
TRAPPC9-211ENST00000521700 MDS2Q8NDY4 140 aa16.7■□□□□ 0.26
TRAPPC9-211ENST00000521700 SIGLEC12Q96PQ1 595 aa16.7■□□□□ 0.26
TRAPPC9-211ENST00000521700 UTP23Q9BRU9 249 aaKnown RBP16.7■□□□□ 0.26
TRAPPC9-211ENST00000521700 ALOXE3Q9BYJ1 711 aa16.7■□□□□ 0.26
TRAPPC9-211ENST00000521700 DEFB126Q9BYW3 111 aa16.7■□□□□ 0.26
TRAPPC9-211ENST00000521700 PSD3Q9NYI0 1048 aa16.7■□□□□ 0.26
TRAPPC9-211ENST00000521700 PPIEQ9UNP9 301 aaKnown RBP16.7■□□□□ 0.26
TRAPPC9-211ENST00000521700 HECTD1Q9ULT8 2610 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 A8MT66 165 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 FOXE1O00358 373 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 LDB3O75112 727 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 AGFG2O95081 481 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 CPN2P22792 545 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 ARL1P40616 181 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 CLCN2P51788 898 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 ARFIP1P53367 373 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 MLF1P58340 268 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 PHEXP78562 749 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 STX4Q12846 297 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 TRAF3Q13114 568 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 CUL3Q13618 768 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 OR1C1Q15619 314 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 INAQ16352 499 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 ZNF766Q5HY98 468 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 ZNF468Q5VIY5 522 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 SPINK14Q6IE38 97 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 RPS27LQ71UM5 84 aaKnown RBP16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 MZB1Q8WU39 189 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 MTFMTQ96DP5 389 aaKnown RBP16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 SLX1AQ9BQ83 275 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 CENPKQ9BS16 269 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 ZNF717Q9BY31 904 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 ADAP2Q9NPF8 381 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 SEMA4BQ9NPR2 832 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 OLAHQ9NV23 265 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 PSMC3IPQ9P2W1 217 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 VTI1BQ9UEU0 232 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 TBK1Q9UHD2 729 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 ZNF223Q9UK11 482 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 SPACA6W5XKT8 324 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 PTPN13Q12923 2485 aa16.69■□□□□ 0.26
TRAPPC9-211ENST00000521700 HIVEP3Q5T1R4 2406 aa16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 SVILO95425 2214 aa16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 TRBV11-1A0A0K0K1C0 115 aa16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 A0A1B0GTL3 188 aa16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 GOLGA8RI6L899 631 aa16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 PPP6CO00743 305 aa16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 RASAL1O95294 804 aa16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 IFNA16P05015 189 aa16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 EDN3P14138 238 aa16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 TPP2P29144 1249 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 BSGP35613 385 aa16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 CDH13P55290 713 aa16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 OC90Q02509 493 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 ELOAQ14241 798 aaKnown RBP16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 ELAVL1Q15717 326 aaKnown RBP16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 MILR1Q7Z6M3 343 aa16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 LCA5Q86VQ0 697 aa16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 ARMC10Q8N2F6 343 aa16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 TMEM132CQ8N3T6 1108 aa16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 ZCCHC7Q8N3Z6 543 aaKnown RBP16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 OR4F6Q8NGB9 312 aa16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 ZNF483Q8TF39 744 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 PTPMT1Q8WUK0 201 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 NCLNQ969V3 563 aa16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 ANKRD9Q96BM1 317 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 VMP1Q96GC9 406 aa16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 CCDC77Q9BR77 488 aa16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 C1QTNF3Q9BXJ4 246 aa16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 HES7Q9BYE0 225 aa16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 PCDHGB6Q9Y5F9 930 aa16.68■□□□□ 0.26
TRAPPC9-211ENST00000521700 BLACEA4D250 179 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 SYNDIG1LA6NDD5 238 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 CDK2AP1O14519 115 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 EEDO75530 441 aaKnown RBP16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 NEURL1O76050 574 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 SHBGP04278 402 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 PYGBP11216 843 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 TSPAN8P19075 237 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 TNFRSF8P28908 595 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 HNRNPH2P55795 449 aaKnown RBP16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 ID2Q02363 134 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 SRSF11Q05519 484 aaKnown RBP16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 FRG2Q64ET8 278 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 C18orf63Q68DL7 685 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 GPR180Q86V85 440 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 OR4N5Q8IXE1 308 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 ACMSDQ8TDX5 336 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 THAP3Q8WTV1 239 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 NR4A3Q92570 626 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 SCMH1Q96GD3 660 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 PSMG3-AS1Q96PY0 264 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 FRG2BQ96QU4 278 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 DDX31Q9H8H2 851 aaKnown RBP16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 KLHL1Q9NR64 748 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 MS4A12Q9NXJ0 267 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 LRFN1Q9P244 771 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 PPT2Q9UMR5 302 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms