RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 SPACA6W5XKT8 324 aa19.33■□□□□ 0.68
TRIM35-203ENST00000521253 FLNCQ14315 2725 aa19.33■□□□□ 0.68
TRIM35-203ENST00000521253 G3V2L1 256 aa19.32■□□□□ 0.68
TRIM35-203ENST00000521253 CTNSO60931 367 aa19.32■□□□□ 0.68
TRIM35-203ENST00000521253 EEDO75530 441 aaKnown RBP19.32■□□□□ 0.68
TRIM35-203ENST00000521253 WDPCPO95876 746 aa19.32■□□□□ 0.68
TRIM35-203ENST00000521253 F10P00742 488 aa19.32■□□□□ 0.68
TRIM35-203ENST00000521253 PROCP04070 461 aa19.32■□□□□ 0.68
TRIM35-203ENST00000521253 CPN2P22792 545 aa19.32■□□□□ 0.68
TRIM35-203ENST00000521253 CRHR1P34998 444 aa19.32■□□□□ 0.68
TRIM35-203ENST00000521253 BSGP35613 385 aa19.32■□□□□ 0.68
TRIM35-203ENST00000521253 CCT5P48643 541 aa19.32■□□□□ 0.68
TRIM35-203ENST00000521253 KCNC4Q03721 635 aa19.32■□□□□ 0.68
TRIM35-203ENST00000521253 ZNF169Q14929 603 aaPredicted RBP19.32■□□□□ 0.68
TRIM35-203ENST00000521253 SGO1Q5FBB7 561 aa19.32■□□□□ 0.68
TRIM35-203ENST00000521253 ACER2Q5QJU3 275 aa19.32■□□□□ 0.68
TRIM35-203ENST00000521253 C10orf62Q5T681 223 aaPredicted RBP19.32■□□□□ 0.68
TRIM35-203ENST00000521253 C4orf33Q8N1A6 199 aa19.32■□□□□ 0.68
TRIM35-203ENST00000521253 KIF2BQ8N4N8 673 aa19.32■□□□□ 0.68
TRIM35-203ENST00000521253 EFCAB3Q8N7B9 438 aa19.32■□□□□ 0.68
TRIM35-203ENST00000521253 ELP5Q8TE02 316 aa19.32■□□□□ 0.68
TRIM35-203ENST00000521253 HAS2Q92819 552 aa19.32■□□□□ 0.68
TRIM35-203ENST00000521253 L3HYPDHQ96EM0 354 aa19.32■□□□□ 0.68
TRIM35-203ENST00000521253 NPAS2Q99743 824 aa19.32■□□□□ 0.68
TRIM35-203ENST00000521253 ELOVL6Q9H5J4 265 aa19.32■□□□□ 0.68
TRIM35-203ENST00000521253 FARSBQ9NSD9 589 aaKnown RBP19.32■□□□□ 0.68
TRIM35-203ENST00000521253 TRPS1Q9UHF7 1281 aa19.32■□□□□ 0.68
TRIM35-203ENST00000521253 GRID1Q9ULK0 1009 aa19.32■□□□□ 0.68
TRIM35-203ENST00000521253 COPEO14579 308 aa19.31■□□□□ 0.68
TRIM35-203ENST00000521253 PLIN3O60664 434 aa19.31■□□□□ 0.68
TRIM35-203ENST00000521253 MYO1DO94832 1006 aa19.31■□□□□ 0.68
TRIM35-203ENST00000521253 OR4F21O95013 312 aa19.31■□□□□ 0.68
TRIM35-203ENST00000521253 SEMA3DO95025 777 aa19.31■□□□□ 0.68
TRIM35-203ENST00000521253 MYL2P10916 166 aa19.31■□□□□ 0.68
TRIM35-203ENST00000521253 SLC18A2Q05940 514 aa19.31■□□□□ 0.68
TRIM35-203ENST00000521253 IFFO1Q0D2I5 559 aa19.31■□□□□ 0.68
TRIM35-203ENST00000521253 TERF2Q15554 542 aa19.31■□□□□ 0.68
TRIM35-203ENST00000521253 CCDC153Q494R4 210 aa19.31■□□□□ 0.68
TRIM35-203ENST00000521253 ZYG11AQ6WRX3 759 aa19.31■□□□□ 0.68
TRIM35-203ENST00000521253 GPR180Q86V85 440 aa19.31■□□□□ 0.68
TRIM35-203ENST00000521253 CRLF3Q8IUI8 442 aa19.31■□□□□ 0.68
TRIM35-203ENST00000521253 CISD2Q8N5K1 135 aaKnown RBP19.31■□□□□ 0.68
TRIM35-203ENST00000521253 MYRIPQ8NFW9 859 aa19.31■□□□□ 0.68
TRIM35-203ENST00000521253 SNRNP40Q96DI7 357 aaKnown RBP19.31■□□□□ 0.68
TRIM35-203ENST00000521253 C19orf60Q96EN9 201 aa19.31■□□□□ 0.68
TRIM35-203ENST00000521253 ZNF354BQ96LW1 612 aa19.31■□□□□ 0.68
TRIM35-203ENST00000521253 ZNF382Q96SR6 550 aa19.31■□□□□ 0.68
TRIM35-203ENST00000521253 RNF32Q9H0A6 362 aa19.31■□□□□ 0.68
TRIM35-203ENST00000521253 C12orf65Q9H3J6 166 aaKnown RBP19.31■□□□□ 0.68
TRIM35-203ENST00000521253 DDX31Q9H8H2 851 aaKnown RBP19.31■□□□□ 0.68
TRIM35-203ENST00000521253 ATG4BQ9Y4P1 393 aa19.31■□□□□ 0.68
TRIM35-203ENST00000521253 RP1L1Q8IWN7 2480 aaPredicted RBP19.31■□□□□ 0.68
TRIM35-203ENST00000521253 A0A0A6YYD5 115 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 MYOCOSA0A1B0GUC4 107 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 BLACEA4D250 179 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 TMPRSS11DO60235 418 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 MAN1A2O60476 641 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 LDB3O75112 727 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 PDYNP01213 254 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 TNFSF10P50591 281 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 HNRNPH2P55795 449 aaKnown RBP19.3■□□□□ 0.68
TRIM35-203ENST00000521253 TAS2R50P59544 299 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 STX4Q12846 297 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 MRM1Q6IN84 353 aaKnown RBP19.3■□□□□ 0.68
TRIM35-203ENST00000521253 GPRIN3Q6ZVF9 776 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 NUDT13Q86X67 352 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 BEST3Q8N1M1 668 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 RIBC1Q8N443 379 aaPredicted RBP19.3■□□□□ 0.68
TRIM35-203ENST00000521253 SLC5A8Q8N695 610 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 CDYL2Q8N8U2 506 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 SELENOMQ8WWX9 145 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 ALOXE3Q9BYJ1 711 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 CLMPQ9H6B4 373 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 ADAP2Q9NPF8 381 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 MS4A12Q9NXJ0 267 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 MAP10Q9P2G4 905 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 LGALS13Q9UHV8 139 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 PHF11Q9UIL8 331 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 SNX6Q9UNH7 406 aa19.3■□□□□ 0.68
TRIM35-203ENST00000521253 MLYCDO95822 493 aa19.29■□□□□ 0.68
TRIM35-203ENST00000521253 GBAP04062 536 aa19.29■□□□□ 0.68
TRIM35-203ENST00000521253 IFNA16P05015 189 aa19.29■□□□□ 0.68
TRIM35-203ENST00000521253 TNFRSF17Q02223 184 aa19.29■□□□□ 0.68
TRIM35-203ENST00000521253 ID2Q02363 134 aa19.29■□□□□ 0.68
TRIM35-203ENST00000521253 LCP2Q13094 533 aa19.29■□□□□ 0.68
TRIM35-203ENST00000521253 MEP1AQ16819 746 aa19.29■□□□□ 0.68
TRIM35-203ENST00000521253 TCHHL1Q5QJ38 904 aaPredicted RBP19.29■□□□□ 0.68
TRIM35-203ENST00000521253 C18orf63Q68DL7 685 aa19.29■□□□□ 0.68
TRIM35-203ENST00000521253 ATCAYQ86WG3 371 aa19.29■□□□□ 0.68
TRIM35-203ENST00000521253 MREGQ8N565 214 aa19.29■□□□□ 0.68
TRIM35-203ENST00000521253 CCNYL1Q8N7R7 359 aa19.29■□□□□ 0.68
TRIM35-203ENST00000521253 APCDD1LQ8NCL9 501 aa19.29■□□□□ 0.68
TRIM35-203ENST00000521253 B3GNT7Q8NFL0 401 aa19.29■□□□□ 0.68
TRIM35-203ENST00000521253 OR1N1Q8NGS0 311 aa19.29■□□□□ 0.68
TRIM35-203ENST00000521253 ANKRD9Q96BM1 317 aaPredicted RBP19.29■□□□□ 0.68
TRIM35-203ENST00000521253 CCDC126Q96EE4 140 aa19.29■□□□□ 0.68
TRIM35-203ENST00000521253 MRPL1Q9BYD6 325 aaKnown RBP19.29■□□□□ 0.68
TRIM35-203ENST00000521253 ROPN1BQ9BZX4 212 aaPredicted RBP19.29■□□□□ 0.68
TRIM35-203ENST00000521253 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.29■□□□□ 0.68
TRIM35-203ENST00000521253 GSTO2Q9H4Y5 243 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms