RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 TGFBR3LH3BV60 316 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 K7EM74 188 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 AZIN1O14977 448 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 BIRC5O15392 142 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 PRKRAO75569 313 aaKnown RBP13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 SEC24DO94855 1032 aaPredicted RBP13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 CPN2P22792 545 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 ARFIP1P53367 373 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 GALNT1Q10472 559 aaPredicted RBP13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 KCNAB2Q13303 367 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 RCN2Q14257 317 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 CHI3L2Q15782 390 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 TTMPQ5BVD1 217 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 HHATQ5VTY9 493 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 MRM1Q6IN84 353 aaKnown RBP13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 NDUFAF7Q7L592 441 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 COMMD6Q7Z4G1 85 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 ZNF605Q86T29 641 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 GPR180Q86V85 440 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 SCUBE1Q8IWY4 988 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 ZCCHC7Q8N3Z6 543 aaKnown RBP13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 C1orf52Q8N6N3 182 aaKnown RBP13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 EFCAB3Q8N7B9 438 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 PPP1R14CQ8TAE6 165 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 AGR3Q8TD06 166 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 SREK1Q8WXA9 508 aaKnown RBP13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 UCN3Q969E3 161 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 WBP1Q96G27 269 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 ABHD17AQ96GS6 310 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 WDR77Q9BQA1 342 aaPredicted RBP13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 ZNF700Q9H0M5 742 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 VIPAS39Q9H9C1 493 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 ATP13A2Q9NQ11 1180 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 PRDM9Q9NQV7 894 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 PRTFDC1Q9NRG1 225 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 AHSPQ9NZD4 102 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 VPS29Q9UBQ0 182 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 ASB4Q9Y574 426 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 PTGDR2Q9Y5Y4 395 aa13.7□□□□□ -0.22
SCARNA21-201ENST00000517026 BSNQ9UPA5 3926 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 IGKV3D-11A0A0A0MRZ8 115 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 NSG1A0A0A6YYJ2 146 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 A0A1W2PQ72 361 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 A0A1W2PR48 441 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 H3BQF6 201 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 ITM2AO43736 263 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 LYPLA1O75608 230 aaPredicted RBP13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 HPP00738 406 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 SERPINE1P05121 402 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 CELA2AP08217 269 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 CYC1P08574 325 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 FAM58BPP0C7Q3 252 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 UROSP10746 265 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 HSD3B1P14060 373 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 NR1D1P20393 614 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 BGNP21810 368 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 HSD3B2P26439 372 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 TPP2P29144 1249 aaPredicted RBP13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 PPP2R1BP30154 601 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 TSFMP43897 325 aaKnown RBP13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 OR4D2P58180 307 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 ID2Q02363 134 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 BTKQ06187 659 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 CSTF3Q12996 717 aaKnown RBP13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 SLC13A2Q13183 592 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 SFT2D3Q587I9 215 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 C18orf63Q68DL7 685 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 CYP20A1Q6UW02 462 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 QSOX2Q6ZRP7 698 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 NUDT13Q86X67 352 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 GALNT16Q8N428 558 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 GBP7Q8N8V2 638 aaPredicted RBP13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 CLEC1AQ8NC01 280 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 FDCSPQ8NFU4 85 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 ADAMTS18Q8TE60 1221 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 CHTF18Q8WVB6 975 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 APIPQ96GX9 242 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 VPS50Q96JG6 964 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 SH3GL2Q99962 352 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 ZNF71Q9NQZ8 489 aaPredicted RBP13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 NMRK1Q9NWW6 199 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 TRAF6Q9Y4K3 522 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 MMACHCQ9Y4U1 282 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 CLDN16Q9Y5I7 305 aa13.69□□□□□ -0.22
SCARNA21-201ENST00000517026 UQCRHLA0A096LP55 91 aa13.68□□□□□ -0.22
SCARNA21-201ENST00000517026 GLOD5A6NK44 160 aa13.68□□□□□ -0.22
SCARNA21-201ENST00000517026 A8MUA0 341 aa13.68□□□□□ -0.22
SCARNA21-201ENST00000517026 CLDN4O14493 209 aa13.68□□□□□ -0.22
SCARNA21-201ENST00000517026 PCDH17O14917 1159 aa13.68□□□□□ -0.22
SCARNA21-201ENST00000517026 PROM1O43490 865 aa13.68□□□□□ -0.22
SCARNA21-201ENST00000517026 CTNSO60931 367 aa13.68□□□□□ -0.22
SCARNA21-201ENST00000517026 CEACAM4O75871 244 aa13.68□□□□□ -0.22
SCARNA21-201ENST00000517026 PDGFAP04085 211 aa13.68□□□□□ -0.22
SCARNA21-201ENST00000517026 UQCRHP07919 91 aa13.68□□□□□ -0.22
SCARNA21-201ENST00000517026 ITGA3P26006 1051 aa13.68□□□□□ -0.22
SCARNA21-201ENST00000517026 HSD17B7P56937 341 aa13.68□□□□□ -0.22
SCARNA21-201ENST00000517026 ACTN3Q08043 901 aaPredicted RBP13.68□□□□□ -0.22
SCARNA21-201ENST00000517026 AIMP2Q13155 320 aaKnown RBP13.68□□□□□ -0.22
SCARNA21-201ENST00000517026 CCNYL2Q5T2Q4 361 aa13.68□□□□□ -0.22
SCARNA21-201ENST00000517026 KANK2Q63ZY3 851 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms