RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 SLKQ9H2G2 1235 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 TTYH1Q9H313 450 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 TLE6Q9H808 572 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 NGBQ9NPG2 151 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 ALKBH4Q9NXW9 302 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 CRNNQ9UBG3 495 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 MKLN1Q9UL63 735 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 NAP1L2Q9ULW6 460 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 RIPOR2Q9Y4F9 1068 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 DYNC1LI1Q9Y6G9 523 aaKnown RBP-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 S4R3C0 116 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 IGSF1Q8N6C5 1336 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 PLEKHD1A6NEE1 506 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 ZNF705GA8MUZ8 300 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 SIGLEC5O15389 551 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 ANP32CO43423 234 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 ACADLP28330 430 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 UQCRFS1P47985 274 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 PRKAA2P54646 552 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 TPD52P55327 224 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 PEX3P56589 373 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 MICAQ29983 383 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 ZNF181Q2M3W8 571 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 CNPY1Q3B7I2 92 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 PIGGQ5H8A4 983 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 ELFN2Q5R3F8 820 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 C1orf94Q6P1W5 598 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 TRPM8Q7Z2W7 1104 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 TRMT11Q7Z4G4 463 aaKnown RBP-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 GALNT5Q7Z7M9 940 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 MEX3DQ86XN8 651 aaKnown RBP-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 DND1Q8IYX4 353 aaKnown RBP-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 PRPF38AQ8NAV1 312 aaKnown RBP-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 BEST4Q8NFU0 473 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 C7orf33Q8WU49 177 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 AFG1LQ8WV93 481 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 GIMAP1Q8WWP7 306 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 MUL1Q969V5 352 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 RILPL2Q969X0 211 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 SNRNP40Q96DI7 357 aaKnown RBP-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 ELP4Q96EB1 424 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 NEDD4LQ96PU5 975 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 KCNA7Q96RP8 456 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 HGH1Q9BTY7 390 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 C10orf95Q9H7T3 257 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 KCNK13Q9HB14 408 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 APMAPQ9HDC9 416 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 AASDHPPTQ9NRN7 309 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 ABCB8Q9NUT2 735 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 ZNF629Q9UEG4 869 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 FBXW11Q9UKB1 542 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 GMEB2Q9UKD1 530 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 HBS1LQ9Y450 684 aaKnown RBP-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 GTF3C3Q9Y5Q9 886 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 ACEP12821 1306 aa-1.4□□□□□ -2.63
RNU6-542P-201ENST00000516405 ANKRD12Q6UB98 2062 aa-1.41□□□□□ -2.63
RNU6-542P-201ENST00000516405 TSPY2A6NKD2 308 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 E7EQL1 145 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 SPECC1L-ADORA2AF8WAN1 911 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 O00370 1275 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 PMM2O15305 246 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 NUPL2O15504 423 aaKnown RBP-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 AHCYL1O43865 530 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 ZBED4O75132 1171 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 NKX2-2O95096 273 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 TBX18O95935 607 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 TSPY3P0CV98 308 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 TSPY4P0CV99 314 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 TSPY8P0CW00 308 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 TSPY10P0CW01 314 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 GLULP15104 373 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 PDGFRAP16234 1089 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 NMBRP28336 390 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 MCM2P49736 904 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 TAS2R40P59535 323 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 PPP2R2BQ00005 443 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 ZNF85Q03923 595 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 PRKCDQ05655 676 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 GALEQ14376 348 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 SPARCL1Q14515 664 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 CA9Q16790 459 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 HNRNPA1L2Q32P51 320 aaKnown RBP-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 KRTAP20-2Q3LI61 65 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 UGT3A2Q3SY77 523 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 FAM209BQ5JX69 171 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 CCSAPQ6IQ19 270 aaPredicted RBP-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 ANKRD26P1Q6NSI1 321 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 ZNF573Q86YE8 665 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 NKAPQ8N5F7 415 aaKnown RBP-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 RASGEF1AQ8N9B8 481 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 XXYLT1Q8NBI6 393 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 TMEM104Q8NE00 496 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 OR2AJ1Q8NGZ0 328 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 GOLGA1Q92805 767 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 CASP10Q92851 521 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 MAELQ96JY0 434 aaKnown RBP-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 TMEM68Q96MH6 324 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 IL4I1Q96RQ9 567 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 ZNF607Q96SK3 696 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 ELAC2Q9BQ52 826 aaKnown RBP-1.41□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms