RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 ACKR1Q16570 336 aa10.29□□□□□ -0.76
RNF4-218ENST00000513284 LRRC8EQ6NSJ5 796 aa10.29□□□□□ -0.76
RNF4-218ENST00000513284 ZNF549Q6P9A3 640 aa10.29□□□□□ -0.76
RNF4-218ENST00000513284 MBOAT1Q6ZNC8 495 aa10.29□□□□□ -0.76
RNF4-218ENST00000513284 C17orf64Q86WR6 236 aa10.29□□□□□ -0.76
RNF4-218ENST00000513284 LMNTD2Q8IXW0 634 aa10.29□□□□□ -0.76
RNF4-218ENST00000513284 LRRC25Q8N386 305 aaPredicted RBP10.29□□□□□ -0.76
RNF4-218ENST00000513284 GOLM1Q8NBJ4 401 aa10.29□□□□□ -0.76
RNF4-218ENST00000513284 ABHD11Q8NFV4 315 aa10.29□□□□□ -0.76
RNF4-218ENST00000513284 NEIL3Q8TAT5 605 aa10.29□□□□□ -0.76
RNF4-218ENST00000513284 NT5CQ8TCD5 201 aa10.29□□□□□ -0.76
RNF4-218ENST00000513284 CALML6Q8TD86 181 aa10.29□□□□□ -0.76
RNF4-218ENST00000513284 IGFBPL1Q8WX77 278 aa10.29□□□□□ -0.76
RNF4-218ENST00000513284 TMEM158Q8WZ71 300 aa10.29□□□□□ -0.76
RNF4-218ENST00000513284 SGCZQ96LD1 299 aa10.29□□□□□ -0.76
RNF4-218ENST00000513284 TIMP4Q99727 224 aa10.29□□□□□ -0.76
RNF4-218ENST00000513284 SGPP1Q9BX95 441 aa10.29□□□□□ -0.76
RNF4-218ENST00000513284 EXO5Q9H790 373 aa10.29□□□□□ -0.76
RNF4-218ENST00000513284 ZNF703Q9H7S9 590 aaPredicted RBP10.29□□□□□ -0.76
RNF4-218ENST00000513284 CLK4Q9HAZ1 481 aaKnown RBP10.29□□□□□ -0.76
RNF4-218ENST00000513284 SACM1LQ9NTJ5 587 aa10.29□□□□□ -0.76
RNF4-218ENST00000513284 SYBUQ9NX95 663 aa10.29□□□□□ -0.76
RNF4-218ENST00000513284 ADAMTS6Q9UKP5 1117 aa10.29□□□□□ -0.76
RNF4-218ENST00000513284 COMMD10Q9Y6G5 202 aa10.29□□□□□ -0.76
RNF4-218ENST00000513284 MYOCOSA0A1B0GUC4 107 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 SH3D21A4FU49 640 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 PABPN1LA6NDY0 278 aaKnown RBP10.28□□□□□ -0.76
RNF4-218ENST00000513284 DEFB108AA8MXU0 73 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 IL2RAP01589 272 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 FGGP02679 453 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 BMP7P18075 431 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 CTSSP25774 331 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 HNF4AP41235 474 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 CRYZQ08257 329 aaKnown RBP10.28□□□□□ -0.76
RNF4-218ENST00000513284 FOXF2Q12947 444 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 NAE1Q13564 534 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 DHX34Q14147 1143 aaKnown RBP10.28□□□□□ -0.76
RNF4-218ENST00000513284 ZNF791Q3KP31 576 aaPredicted RBP10.28□□□□□ -0.76
RNF4-218ENST00000513284 NSUN5P2Q63ZY6 315 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 UGT3A1Q6NUS8 523 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 NEPROQ6NW34 567 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 PODNL1Q6PEZ8 512 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 AGTRAPQ6RW13 159 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 UBE2R2Q712K3 238 aaPredicted RBP10.28□□□□□ -0.76
RNF4-218ENST00000513284 ABHD13Q7L211 337 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 PIWIL4Q7Z3Z4 852 aaKnown RBP10.28□□□□□ -0.76
RNF4-218ENST00000513284 CILP2Q8IUL8 1156 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 LACC1Q8IV20 430 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 ANKRD53Q8N9V6 530 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 TRIM58Q8NG06 486 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 PTPMT1Q8WUK0 201 aaPredicted RBP10.28□□□□□ -0.76
RNF4-218ENST00000513284 KCNJ9Q92806 393 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 OR4K3Q96R72 315 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 CCDC77Q9BR77 488 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 PCBD2Q9H0N5 130 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 C6orf203Q9P0P8 240 aaPredicted RBP10.28□□□□□ -0.76
RNF4-218ENST00000513284 PDE10AQ9Y233 779 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 MMACHCQ9Y4U1 282 aa10.28□□□□□ -0.76
RNF4-218ENST00000513284 NINQ8N4C6 2090 aa10.27□□□□□ -0.76
RNF4-218ENST00000513284 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.27□□□□□ -0.77
RNF4-218ENST00000513284 TRBC2A0A5B9 178 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 EIF3FO00303 357 aaPredicted RBP10.27□□□□□ -0.77
RNF4-218ENST00000513284 SOX30O94993 753 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 IL18BPO95998 194 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 SERPIND1P05546 499 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 CCDC175P0C221 793 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 MLNP12872 115 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 GRK3P35626 688 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 SCTRP47872 440 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 RGS4P49798 205 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 SKP1P63208 163 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 DUSP8Q13202 625 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 SIX1Q15475 284 aaPredicted RBP10.27□□□□□ -0.77
RNF4-218ENST00000513284 ZNF470Q6ECI4 717 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 HEPHL1Q6MZM0 1159 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 LCTLQ6UWM7 567 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 LYPD8Q6UX82 237 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 HSDL2Q6YN16 418 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 STRA8Q7Z7C7 330 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 HIPK1Q86Z02 1210 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 PALM2Q8IXS6 379 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 MAPK1IP1LQ8NDC0 245 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 ISL2Q96A47 359 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 ZNF669Q96BR6 464 aaPredicted RBP10.27□□□□□ -0.77
RNF4-218ENST00000513284 ALKBH8Q96BT7 664 aaKnown RBP10.27□□□□□ -0.77
RNF4-218ENST00000513284 XAB2Q9HCS7 855 aaKnown RBP10.27□□□□□ -0.77
RNF4-218ENST00000513284 ZFP64Q9NPA5 681 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 GALNT8Q9NY28 637 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 ADGRE2Q9UHX3 823 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 DHRS7Q9Y394 339 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 DSCAMO60469 2012 aa10.27□□□□□ -0.77
RNF4-218ENST00000513284 A0A087X1B8 175 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 MBD3L3A6NE82 208 aaPredicted RBP10.26□□□□□ -0.77
RNF4-218ENST00000513284 CD8B2A6NJW9 211 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 SDR42E2A6NKP2 422 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 EEF1E1-BLOC1S5C9J1V9 151 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 PSMD12O00232 456 aaPredicted RBP10.26□□□□□ -0.77
RNF4-218ENST00000513284 EEF1E1O43324 174 aaKnown RBP10.26□□□□□ -0.77
RNF4-218ENST00000513284 P04436 131 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 CCND1P24385 295 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms