RNA–Protein interactions for RNA: ENST00000513259.5

SNHG4-207, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 5

Gene SNHG4, Length 444 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-207ENST00000513259 HOXC12P31275 282 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 CASQ1P31415 396 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 SOX3P41225 446 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 MAGEA3P43357 314 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 MAN2A2P49641 1150 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 SKP1P63208 163 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 TIAL1Q01085 375 aaKnown RBP eCLIP8.21□□□□□ -1.1
SNHG4-207ENST00000513259 RGS1Q08116 209 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 C2orf54Q08AI8 447 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 THOC5Q13769 683 aaKnown RBP8.21□□□□□ -1.1
SNHG4-207ENST00000513259 PHKG1Q16816 387 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 FLYWCH1Q4VC44 716 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 RIPPLY2Q5TAB7 128 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 NDUFAF5Q5TEU4 345 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 NIPAL1Q6NVV3 410 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 CASC4Q6P4E1 433 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 C4orf22Q6V702 233 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 ABHD13Q7L211 337 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 GPALPP1Q8IXQ4 340 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 CA13Q8N1Q1 262 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 FAM109AQ8N4B1 249 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 FAM222BQ8WU58 562 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 ASB15Q8WXK1 588 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 ARSGQ96EG1 525 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 SNF8Q96H20 258 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 SMIM10Q96HG1 83 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 SERPINB12Q96P63 405 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 OR4K3Q96R72 315 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 RASL10BQ96S79 203 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 NAP1L3Q99457 506 aaPredicted RBP8.21□□□□□ -1.1
SNHG4-207ENST00000513259 CCDC77Q9BR77 488 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 HAUS8Q9BT25 410 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 TRIM31Q9BZY9 425 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 AICDAQ9GZX7 198 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 CCDC68Q9H2F9 335 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 CLK4Q9HAZ1 481 aaKnown RBP8.21□□□□□ -1.1
SNHG4-207ENST00000513259 IL1RL2Q9HB29 575 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 PARVBQ9HBI1 364 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 SEMA4BQ9NPR2 832 aaPredicted RBP8.21□□□□□ -1.1
SNHG4-207ENST00000513259 ZFP69BQ9UJL9 534 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 PPIEQ9UNP9 301 aaKnown RBP8.21□□□□□ -1.1
SNHG4-207ENST00000513259 FREM3P0C091 2139 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 TLN2Q9Y4G6 2542 aa8.21□□□□□ -1.1
SNHG4-207ENST00000513259 CSPG4Q6UVK1 2322 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 MYOCOSA0A1B0GUC4 107 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 DNALI1O14645 258 aaPredicted RBP8.2□□□□□ -1.1
SNHG4-207ENST00000513259 SUSD5O60279 629 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 ZNF354AO60765 605 aaPredicted RBP8.2□□□□□ -1.1
SNHG4-207ENST00000513259 WDR1O75083 606 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 LY6G6DO95868 133 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 C8GP07360 202 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 PAMP19021 973 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 ENDOUP21128 410 aaKnown RBP8.2□□□□□ -1.1
SNHG4-207ENST00000513259 CCND1P24385 295 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 GPC1P35052 558 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 RPL21P46778 160 aaKnown RBP8.2□□□□□ -1.1
SNHG4-207ENST00000513259 SCTRP47872 440 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 DNASE1L1P49184 302 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 HNRNPFP52597 415 aaKnown RBP8.2□□□□□ -1.1
SNHG4-207ENST00000513259 BTN3A2P78410 334 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 FOXO1Q12778 655 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 BMPR2Q13873 1038 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 RUNX2Q13950 521 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 KEAP1Q14145 624 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 DHX34Q14147 1143 aaKnown RBP8.2□□□□□ -1.1
SNHG4-207ENST00000513259 SLC10A1Q14973 349 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 DAZAP2Q15038 168 aaPredicted RBP8.2□□□□□ -1.1
SNHG4-207ENST00000513259 PPP1R7Q15435 360 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 TERF2Q15554 542 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 TOR1AIP1Q5JTV8 583 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 WLSQ5T9L3 541 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 GK5Q6ZS86 529 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 SEM1Q6ZVN7 128 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 STRA8Q7Z7C7 330 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 KRTAP1-3Q8IUG1 177 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 SCUBE1Q8IWY4 988 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 ANKRD53Q8N9V6 530 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 RELL2Q8NC24 303 aaPredicted RBP8.2□□□□□ -1.1
SNHG4-207ENST00000513259 TMEM52Q8NDY8 209 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 MCUQ8NE86 351 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 SPATA4Q8NEY3 305 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 OR56A3Q8NH54 315 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 NEIL2Q969S2 332 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 ZNF669Q96BR6 464 aaPredicted RBP8.2□□□□□ -1.1
SNHG4-207ENST00000513259 SCYL1Q96KG9 808 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 SH3GL2Q99962 352 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 FAM173AQ9BQD7 235 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 AARSD1Q9BTE6 412 aaKnown RBP8.2□□□□□ -1.1
SNHG4-207ENST00000513259 LDAHQ9H6V9 325 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 TUBA8Q9NY65 449 aaPredicted RBP8.2□□□□□ -1.1
SNHG4-207ENST00000513259 SPRR3Q9UBC9 169 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 MYOTQ9UBF9 498 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 ASIC3Q9UHC3 531 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 MMACHCQ9Y4U1 282 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 CLDN16Q9Y5I7 305 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 MXRA5Q9NR99 2828 aa8.2□□□□□ -1.1
SNHG4-207ENST00000513259 ATRQ13535 2644 aa8.19□□□□□ -1.1
SNHG4-207ENST00000513259 KIAA1549Q9HCM3 1950 aa8.19□□□□□ -1.1
SNHG4-207ENST00000513259 TRGV5A0A0B4J1U4 118 aa8.19□□□□□ -1.1
SNHG4-207ENST00000513259 A0A0G2JN53 185 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms