RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 CA12O43570 354 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 PIM1P11309 404 aaPredicted RBP10.19□□□□□ -0.78
NEK1-206ENST00000510533 BCKDHAP12694 445 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 TIA1P31483 386 aaKnown RBP eCLIP10.19□□□□□ -0.78
NEK1-206ENST00000510533 SOX2P48431 317 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 FNTBP49356 437 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 GABARAPL2P60520 117 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 FAM72AQ5TYM5 149 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 FAM72DQ6L9T8 149 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 Q6ZVL8 140 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 FAM72BQ86X60 149 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 OR8K3Q8NH51 312 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 COQ8AQ8NI60 647 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 HSPA12BQ96MM6 686 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 PRAP1Q96NZ9 151 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 RANBP9Q96S59 729 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 CMKLR1Q99788 373 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 XKR8Q9H6D3 395 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 VNN3Q9NY84 501 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 INSL5Q9Y5Q6 135 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 RNF13O43567 381 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 C1GALT1C1LP0DN25 315 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 ANXA3P12429 323 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 RFC2P35250 354 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 UGT2B10P36537 528 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 ACTC1P68032 377 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 ACTA1P68133 377 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 GRIK2Q13002 908 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 SLC36A3Q495N2 470 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 Q8N402 240 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 OR8J1Q8NGP2 316 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 TRUB1Q8WWH5 349 aaKnown RBP10.19□□□□□ -0.78
NEK1-206ENST00000510533 MGLLQ99685 303 aa10.19□□□□□ -0.78
NEK1-206ENST00000510533 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 HYKKA2RU49 373 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 SOX1O00570 391 aaPredicted RBP10.18□□□□□ -0.78
NEK1-206ENST00000510533 RBBP9O75884 186 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 S1PR4O95977 384 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 HSD3B1P14060 373 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 HSD3B2P26439 372 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 GKP32189 559 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 CLCN2P51788 898 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 ID2Q02363 134 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 SNTA1Q13424 505 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 GPM6BQ13491 265 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 ZNF783Q6ZMS7 281 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 CYS1Q717R9 158 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 SLC9B2Q86UD5 537 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 RASGRP3Q8IV61 690 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 NLGN2Q8NFZ4 835 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 RPLP0P6Q8NHW5 317 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 ZNF461Q8TAF7 563 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.18□□□□□ -0.78
NEK1-206ENST00000510533 FNDC8Q8TC99 324 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 CAPNS2Q96L46 248 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 SLC2A13Q96QE2 648 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 METTL7AQ9H8H3 244 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 FAM118AQ9NWS6 357 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 MAFFQ9ULX9 164 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 FER1L4A9Z1Z3 1794 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 CPED1A4D0V7 1026 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 UNC119BA6NIH7 251 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 LEFTY2O00292 366 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 TNFRSF10BO14763 440 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 KIAA0513O60268 411 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 PET100P0DJ07 73 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 IL7P13232 177 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 GTF2F2P13984 249 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 RBMXP38159 391 aaKnown RBP10.18□□□□□ -0.78
NEK1-206ENST00000510533 CRISP1P54107 249 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 NPRL3Q12980 569 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 CLCA4Q14CN2 919 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 FLYWCH1Q4VC44 716 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 RPL13AP3Q6NVV1 102 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 BLOC1S3Q6QNY0 202 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 CCDC116Q8IYX3 515 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 CHCHD4Q8N4Q1 142 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 CD300LFQ8TDQ1 290 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 SECISBP2Q96T21 854 aaKnown RBP10.18□□□□□ -0.78
NEK1-206ENST00000510533 MAGIXQ9H6Y5 334 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 VRTNQ9H8Y1 702 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 KLF15Q9UIH9 416 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 CNOT11Q9UKZ1 510 aaKnown RBP10.18□□□□□ -0.78
NEK1-206ENST00000510533 GKN3PP0CG01 181 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 NPR2P20594 1047 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 S1PR1P21453 382 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 ACRV1P26436 265 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 HNF1BP35680 557 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 ZNF41P51814 821 aaPredicted RBP10.18□□□□□ -0.78
NEK1-206ENST00000510533 HK3P52790 923 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 PDSS1Q5T2R2 415 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 CNKSR3Q6P9H4 555 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 HAGHLQ6PII5 290 aaPredicted RBP10.18□□□□□ -0.78
NEK1-206ENST00000510533 FIP1L1Q6UN15 594 aaKnown RBP10.18□□□□□ -0.78
NEK1-206ENST00000510533 CEACAM19Q7Z692 300 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 TMEM156Q8N614 296 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 DENND6BQ8NEG7 585 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 OR5T2Q8NGG2 359 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 OR5M3Q8NGP4 307 aa10.18□□□□□ -0.78
NEK1-206ENST00000510533 BRI3BPQ8WY22 251 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms