RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 MRM1Q6IN84 353 aaKnown RBP12.69□□□□□ -0.38
SNF8-206ENST00000509989 METTL2BQ6P1Q9 378 aaKnown RBP12.69□□□□□ -0.38
SNF8-206ENST00000509989 Q6ZS92 163 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 CHSY3Q70JA7 882 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 ZGRF1Q86YA3 2104 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 SRRM1Q8IYB3 904 aaKnown RBP12.69□□□□□ -0.38
SNF8-206ENST00000509989 CISD2Q8N5K1 135 aaKnown RBP12.69□□□□□ -0.38
SNF8-206ENST00000509989 EFCAB3Q8N7B9 438 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 CCNYL1Q8N7R7 359 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 BANPQ8N9N5 519 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 PNPLA2Q96AD5 504 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 MIB2Q96AX9 1013 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 RGMAQ96B86 450 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 CNDP1Q96KN2 507 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 FRG2BQ96QU4 278 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 CLK4Q9HAZ1 481 aaKnown RBP12.69□□□□□ -0.38
SNF8-206ENST00000509989 KCNK13Q9HB14 408 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 TEX10Q9NXF1 929 aaPredicted RBP12.69□□□□□ -0.38
SNF8-206ENST00000509989 ANKRD10Q9NXR5 420 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 C19orf25Q9UFG5 118 aaPredicted RBP12.69□□□□□ -0.38
SNF8-206ENST00000509989 SAGE2PA6NJ88 616 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 HRKO00198 91 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 FOXE1O00358 373 aaPredicted RBP12.68□□□□□ -0.38
SNF8-206ENST00000509989 MANBAO00462 879 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 COPEO14579 308 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 MYO1DO94832 1006 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 CYC1P08574 325 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 MYL2P10916 166 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 CPN2P22792 545 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 PTX3P26022 381 aaPredicted RBP12.68□□□□□ -0.38
SNF8-206ENST00000509989 TPP2P29144 1249 aaPredicted RBP12.68□□□□□ -0.38
SNF8-206ENST00000509989 SERPINB3P29508 390 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 GPR143P51810 404 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 RAP1GDS1P52306 607 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 NAGLUP54802 743 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 SKP1P63208 163 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 FOXK1P85037 733 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 ZNF33BQ06732 778 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 GALNT1Q10472 559 aaPredicted RBP12.68□□□□□ -0.38
SNF8-206ENST00000509989 INPP5JQ15735 1006 aaPredicted RBP12.68□□□□□ -0.38
SNF8-206ENST00000509989 TTC19Q6DKK2 380 aaPredicted RBP12.68□□□□□ -0.38
SNF8-206ENST00000509989 NIPAL1Q6NVV3 410 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 H3F3CQ6NXT2 135 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 C10orf107Q8IVU9 208 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 BEST3Q8N1M1 668 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 ZADH2Q8N4Q0 377 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 MREGQ8N565 214 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 APCDD1LQ8NCL9 501 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 ARMC2Q8NEN0 867 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 DNAJB14Q8TBM8 379 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 M1APQ8TC57 530 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 ELP5Q8TE02 316 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 PPP4R1Q8TF05 950 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 AGAP11Q8TF27 550 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 THAP3Q8WTV1 239 aaPredicted RBP12.68□□□□□ -0.38
SNF8-206ENST00000509989 PTPMT1Q8WUK0 201 aaPredicted RBP12.68□□□□□ -0.38
SNF8-206ENST00000509989 PPWD1Q96BP3 646 aaKnown RBP12.68□□□□□ -0.38
SNF8-206ENST00000509989 SNRNP40Q96DI7 357 aaKnown RBP12.68□□□□□ -0.38
SNF8-206ENST00000509989 LPAR4Q99677 370 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 MECRQ9BV79 373 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 HES7Q9BYE0 225 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 ALOXE3Q9BYJ1 711 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 DDX31Q9H8H2 851 aaKnown RBP12.68□□□□□ -0.38
SNF8-206ENST00000509989 LYRM4Q9HD34 91 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 ASF1BQ9NVP2 202 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 B3GNT3Q9Y2A9 372 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 MMACHCQ9Y4U1 282 aa12.68□□□□□ -0.38
SNF8-206ENST00000509989 PGRMC2O15173 223 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 PROM1O43490 865 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 CTNSO60931 367 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 OTCP00480 354 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 ALPPP05187 535 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 CPA3P15088 417 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 SERPINB1P30740 379 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 ARRB2P32121 409 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 PTGER1P34995 402 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 HSD17B7P56937 341 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 SRSF1Q07955 248 aaKnown RBP eCLIP12.67□□□□□ -0.38
SNF8-206ENST00000509989 TBL3Q12788 808 aaKnown RBP12.67□□□□□ -0.38
SNF8-206ENST00000509989 CUL3Q13618 768 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 ZNF750Q32MQ0 723 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 CES4AQ5XG92 561 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 GPRIN3Q6ZVF9 776 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 GPR180Q86V85 440 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 LCA5Q86VQ0 697 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 CPT1CQ8TCG5 803 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 SELENOMQ8WWX9 145 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 ZIM3Q96PE6 472 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 SIGLEC12Q96PQ1 595 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 LMF1Q96S06 567 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 ZNF382Q96SR6 550 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 GATA5Q9BWX5 397 aaPredicted RBP12.67□□□□□ -0.38
SNF8-206ENST00000509989 CDCP1Q9H5V8 836 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 MMP25Q9NPA2 562 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 STMN3Q9NZ72 180 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 TRPS1Q9UHF7 1281 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 ADGRE2Q9UHX3 823 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 GRID1Q9ULK0 1009 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 G3BP2Q9UN86 482 aaKnown RBP12.67□□□□□ -0.38
SNF8-206ENST00000509989 SLC12A4Q9UP95 1085 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms