RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-223ENST00000509900 AGGF1Q8N302 714 aaeCLIP8.71□□□□□ -1.02
PTPN20-223ENST00000509900 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.71□□□□□ -1.02
PTPN20-223ENST00000509900 TFB1MQ8WVM0 346 aaKnown RBP8.71□□□□□ -1.02
PTPN20-223ENST00000509900 TM4SF19Q96DZ7 209 aa8.71□□□□□ -1.02
PTPN20-223ENST00000509900 WDYHV1Q96HA8 205 aa8.71□□□□□ -1.02
PTPN20-223ENST00000509900 ZFP3Q96NJ6 502 aa8.71□□□□□ -1.02
PTPN20-223ENST00000509900 CCDC77Q9BR77 488 aa8.71□□□□□ -1.02
PTPN20-223ENST00000509900 HAUS4Q9H6D7 363 aa8.71□□□□□ -1.02
PTPN20-223ENST00000509900 PROK2Q9HC23 129 aa8.71□□□□□ -1.02
PTPN20-223ENST00000509900 SRA1Q9HD15 236 aaKnown RBP8.71□□□□□ -1.02
PTPN20-223ENST00000509900 RSPH14Q9UHP6 348 aa8.71□□□□□ -1.02
PTPN20-223ENST00000509900 PACSIN3Q9UKS6 424 aa8.71□□□□□ -1.02
PTPN20-223ENST00000509900 TRIM33Q9UPN9 1127 aa8.71□□□□□ -1.02
PTPN20-223ENST00000509900 PCDHA13Q9Y5I0 950 aa8.71□□□□□ -1.02
PTPN20-223ENST00000509900 SLC22A7Q9Y694 548 aa8.71□□□□□ -1.02
PTPN20-223ENST00000509900 EXPH5Q8NEV8 1989 aa8.71□□□□□ -1.02
PTPN20-223ENST00000509900 CMYA5Q8N3K9 4069 aa8.71□□□□□ -1.02
PTPN20-223ENST00000509900 KCNE1BA0A087WTH5 132 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 FAM234BA2RU67 622 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 ZNF487B1APH4 448 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 H7BY64 318 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 MYO1FO00160 1098 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 TMPRSS2O15393 492 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 TNFSF13O75888 250 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 B3GALT4O96024 378 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 THBDP07204 575 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 DANCRP0C864 163 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 CREB1P16220 341 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 PPP2R1BP30154 601 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 GEMP55040 296 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 DIO3P55073 304 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 DYNLT1P63172 113 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 BEX5Q5H9J7 111 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.7□□□□□ -1.02
PTPN20-223ENST00000509900 E4F1Q66K89 784 aaPredicted RBP8.7□□□□□ -1.02
PTPN20-223ENST00000509900 FBXO15Q8NCQ5 510 aaPredicted RBP8.7□□□□□ -1.02
PTPN20-223ENST00000509900 OR10H5Q8NGA6 315 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 AKAP1Q92667 903 aaKnown RBP eCLIP8.7□□□□□ -1.02
PTPN20-223ENST00000509900 PRAP1Q96NZ9 151 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 FAM111AQ96PZ2 611 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 RHNO1Q9BSD3 238 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 TMEM204Q9BSN7 226 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 CARD6Q9BX69 1037 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 KRTAP17-1Q9BYP8 105 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 BOKQ9UMX3 212 aaPredicted RBP8.7□□□□□ -1.02
PTPN20-223ENST00000509900 LIPT1Q9Y234 373 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 SLC6A5Q9Y345 797 aa8.7□□□□□ -1.02
PTPN20-223ENST00000509900 GALR3O60755 368 aaPredicted RBP8.69□□□□□ -1.02
PTPN20-223ENST00000509900 VENTXO95231 258 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 CCNDBP1O95273 360 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 PECAM1P16284 738 aaPredicted RBP8.69□□□□□ -1.02
PTPN20-223ENST00000509900 MSNP26038 577 aaKnown RBP8.69□□□□□ -1.02
PTPN20-223ENST00000509900 GDF1P27539 372 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 COILP38432 576 aaPredicted RBP8.69□□□□□ -1.02
PTPN20-223ENST00000509900 CCNFP41002 786 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 RPS15AP62244 130 aaKnown RBP8.69□□□□□ -1.02
PTPN20-223ENST00000509900 KCNJ2P63252 427 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 DPCR1Q3MIW9 517 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 COX20Q5RI15 118 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 HECTD2Q5U5R9 776 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 PRAMEF20Q5VT98 475 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 ABHD17CQ6PCB6 329 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 ZNF474Q6S9Z5 364 aaPredicted RBP8.69□□□□□ -1.02
PTPN20-223ENST00000509900 MILR1Q7Z6M3 343 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 AFAP1L2Q8N4X5 818 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 LRRC17Q8N6Y2 441 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 PPFIBP2Q8ND30 876 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 OR9A1PQ8NGU1 263 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 ZPLD1Q8TCW7 415 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 SKA2Q8WVK7 121 aaPredicted RBP8.69□□□□□ -1.02
PTPN20-223ENST00000509900 PDLIM2Q96JY6 352 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 VAT1Q99536 393 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 TM9SF2Q99805 663 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 UGT2B28Q9BY64 529 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 GBA3Q9H227 469 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 EML4Q9HC35 981 aaKnown RBP8.69□□□□□ -1.02
PTPN20-223ENST00000509900 PNO1Q9NRX1 252 aaKnown RBP8.69□□□□□ -1.02
PTPN20-223ENST00000509900 KCNS2Q9ULS6 477 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 CLDN16Q9Y5I7 305 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 MAGED1Q9Y5V3 778 aaPredicted RBP8.69□□□□□ -1.02
PTPN20-223ENST00000509900 MRFAP1Q9Y605 127 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 PLCE1Q9P212 2302 aa8.69□□□□□ -1.02
PTPN20-223ENST00000509900 TMEM89A2RUT3 159 aa8.68□□□□□ -1.02
PTPN20-223ENST00000509900 CCDC162PA2VCL2 907 aa8.68□□□□□ -1.02
PTPN20-223ENST00000509900 FRG2CA6NGY1 282 aa8.68□□□□□ -1.02
PTPN20-223ENST00000509900 SSX4O60224 188 aa8.68□□□□□ -1.02
PTPN20-223ENST00000509900 ANXA9O76027 345 aa8.68□□□□□ -1.02
PTPN20-223ENST00000509900 CYP1A2P05177 515 aa8.68□□□□□ -1.02
PTPN20-223ENST00000509900 HNF1AP20823 631 aa8.68□□□□□ -1.02
PTPN20-223ENST00000509900 EIF3BP55884 814 aaKnown RBP8.68□□□□□ -1.02
PTPN20-223ENST00000509900 ACTG1P63261 375 aa8.68□□□□□ -1.02
PTPN20-223ENST00000509900 ABATP80404 500 aa8.68□□□□□ -1.02
PTPN20-223ENST00000509900 RCAN2Q14206 197 aa8.68□□□□□ -1.02
PTPN20-223ENST00000509900 HERC3Q15034 1050 aa8.68□□□□□ -1.02
PTPN20-223ENST00000509900 TMED2Q15363 201 aa8.68□□□□□ -1.02
PTPN20-223ENST00000509900 DEFB134Q4QY38 66 aa8.68□□□□□ -1.02
PTPN20-223ENST00000509900 NHSL2Q5HYW2 709 aa8.68□□□□□ -1.02
PTPN20-223ENST00000509900 SLC22A10Q63ZE4 541 aa8.68□□□□□ -1.02
PTPN20-223ENST00000509900 ANKRD34AQ69YU3 496 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms