RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 SYT15Q9BQS2 421 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 ANKRD60Q9BZ19 345 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 ARHGAP39Q9C0H5 1083 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 MFFQ9GZY8 342 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 SIDT1Q9NXL6 827 aaKnown RBP3.45□□□□□ -1.86
USP53-205ENST00000509769 USP36Q9P275 1121 aaKnown RBP3.45□□□□□ -1.86
USP53-205ENST00000509769 NARFQ9UHQ1 456 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 ENPP5Q9UJA9 477 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 DNMT3LQ9UJW3 386 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 TMPRSS11EQ9UL52 423 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 COPS3Q9UNS2 423 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 MAP4K5Q9Y4K4 846 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 PCDHB1Q9Y5F3 818 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 NUMBLQ9Y6R0 609 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 TRPM7Q96QT4 1865 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 DAPL1A0PJW8 107 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 CDHR4A6H8M9 788 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 CAPN14A8MX76 684 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 HHLA1C9JL84 531 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 XKRYO14609 159 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 FSCN2O14926 492 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 TNFSF12O43508 249 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 SYT7O43581 403 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 HPGDSO60760 199 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 RBMXL2O75526 392 aaKnown RBP3.45□□□□□ -1.86
USP53-205ENST00000509769 PSMD10O75832 226 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 OR2F2O95006 317 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 GLUD1P00367 558 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 RENP00797 406 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 CYP2A6P11509 494 aaPredicted RBP3.45□□□□□ -1.86
USP53-205ENST00000509769 UGT2B7P16662 529 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 HOXB9P17482 250 aaPredicted RBP3.45□□□□□ -1.86
USP53-205ENST00000509769 MAP3K8P41279 467 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 CASP3P42574 277 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 LEPRP48357 1165 aaKnown RBP3.45□□□□□ -1.86
USP53-205ENST00000509769 KCNC1P48547 511 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 PIGPP57054 158 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 UBE2KP61086 200 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 ZNF616Q08AN1 781 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 BTN1A1Q13410 526 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 OR2F1Q13607 317 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 KEAP1Q14145 624 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 ZNF791Q3KP31 576 aaPredicted RBP3.45□□□□□ -1.86
USP53-205ENST00000509769 OTUD1Q5VV17 481 aaPredicted RBP3.45□□□□□ -1.86
USP53-205ENST00000509769 HLA-DQA1Q5Y7H0 255 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 GPAT2Q6NUI2 795 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 FAM171BQ6P995 826 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 TTLL10Q6ZVT0 673 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 C3orf67Q6ZVT6 689 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 VASH1Q7L8A9 365 aaPredicted RBP3.45□□□□□ -1.86
USP53-205ENST00000509769 SLFN11Q7Z7L1 901 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 MRPL52Q86TS9 123 aaKnown RBP3.45□□□□□ -1.86
USP53-205ENST00000509769 GPAT4Q86UL3 456 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 FAM131BQ86XD5 332 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 PSTKQ8IV42 348 aaKnown RBP3.45□□□□□ -1.86
USP53-205ENST00000509769 ZNF584Q8IVC4 421 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 CDH26Q8IXH8 852 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 TDHQ8IZJ6 230 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 FITM2Q8N6M3 262 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 ZNF439Q8NDP4 499 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 SLC30A7Q8NEW0 376 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 ZDHHC1Q8WTX9 485 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 C10orf82Q8WW14 230 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 ST8SIA4Q92187 359 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 RAB24Q969Q5 203 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 TIFAQ96CG3 184 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 UROC1Q96N76 676 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 URM1Q9BTM9 101 aaKnown RBP3.45□□□□□ -1.86
USP53-205ENST00000509769 FTHL17Q9BXU8 183 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 KCTD10Q9H3F6 313 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 DPEP3Q9H4B8 488 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 SCUBE2Q9NQ36 999 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 ASF1BQ9NVP2 202 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 PARPBPQ9NWS1 579 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 ABRACLQ9P1F3 81 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 FNIP2Q9P278 1114 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 HPSEQ9Y251 543 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 TMEM14AQ9Y6G1 99 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 FAM237BA0A1B0GVD1 139 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 NCF1BA6NI72 391 aaPredicted RBP3.45□□□□□ -1.86
USP53-205ENST00000509769 PP2D1A8MPX8 630 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 A8MVM7 634 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 C17orf112F2Z3M2 114 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 PCDH17O14917 1159 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 KCNAB3O43448 404 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 SOX15O60248 233 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 ADAM11O75078 769 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 NSA2O95478 260 aaKnown RBP3.45□□□□□ -1.86
USP53-205ENST00000509769 ABHD16AO95870 558 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 GH2P01242 217 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 APOA2P02652 100 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 TFP02787 698 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 RHOP08100 348 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 CTSHP09668 335 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 HGFP14210 728 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 NCK1P16333 377 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 TMEM11P17152 192 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 CTRB1P17538 263 aa3.45□□□□□ -1.86
USP53-205ENST00000509769 PGCP20142 388 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms