RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 ZC3H12BQ5HYM0 836 aaKnown RBP13.82□□□□□ -0.2
DDX41-208ENST00000507955 NLGN4XQ8N0W4 816 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 SLC5A8Q8N695 610 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 EXOSC8Q96B26 276 aaKnown RBP13.82□□□□□ -0.2
DDX41-208ENST00000507955 C12orf66Q96MD2 445 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 FERD3LQ96RJ6 166 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 MYADMQ96S97 322 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 INSM2Q96T92 566 aaPredicted RBP13.82□□□□□ -0.2
DDX41-208ENST00000507955 EHD1Q9H4M9 534 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 SFXN1Q9H9B4 322 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 MYNNQ9NPC7 610 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 LHX9Q9NQ69 397 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 TEX10Q9NXF1 929 aaPredicted RBP13.82□□□□□ -0.2
DDX41-208ENST00000507955 PCDHGB1Q9Y5G3 927 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 ATG2AQ2TAZ0 1938 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 OR1F1O43749 312 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 JRKO75564 520 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 MT-ND2P03891 347 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 CDH3P22223 829 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 PTX3P26022 381 aaPredicted RBP13.82□□□□□ -0.2
DDX41-208ENST00000507955 NPRL3Q12980 569 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 SHHQ15465 462 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 DUSP7Q16829 419 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 GCNT6Q5T4J0 391 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 TMEM236Q5W0B7 351 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 LCTLQ6UWM7 567 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 ADAMTSL4Q6UY14 1074 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 DSG4Q86SJ6 1040 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 ZNF513Q8N8E2 541 aaPredicted RBP13.82□□□□□ -0.2
DDX41-208ENST00000507955 OR9Q2Q8NGE9 314 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 OR52N2Q8NGI0 321 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 NIPSNAP1Q9BPW8 284 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 GABARAPL1Q9H0R8 117 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 ATAD3AQ9NVI7 634 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 LYVE1Q9Y5Y7 322 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 MYO10Q9HD67 2058 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 CKAP5Q14008 2032 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 A0A0C4DFX4 3053 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 TMPRSS11DO60235 418 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 B4GALT2O60909 372 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 FADS2O95864 444 aaKnown RBP13.81□□□□□ -0.2
DDX41-208ENST00000507955 C9P02748 559 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 ALPPL2P10696 532 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 PIK3CBP42338 1070 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 MAPK12P53778 367 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 CDK6Q00534 326 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 MVKQ03426 396 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 OXA1LQ15070 435 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 KHDRBS2Q5VWX1 349 aaKnown RBP13.81□□□□□ -0.2
DDX41-208ENST00000507955 UNC5DQ6UXZ4 953 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 GOT1L1Q8NHS2 421 aaPredicted RBP13.81□□□□□ -0.2
DDX41-208ENST00000507955 TM4SF18Q96CE8 201 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 YIPF6Q96EC8 236 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 DUSP21Q9H596 190 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 GON4LQ3T8J9 2241 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 IGKV1-8A0A0C4DH67 115 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 KRBA1A5PL33 1030 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 TMEM247A6NEH6 219 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 TNFRSF11BO00300 401 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 PCDH17O14917 1159 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 SLC35G4P0C7Q5 338 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 BSGP35613 385 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 MAGEA10P43363 369 aaPredicted RBP13.81□□□□□ -0.2
DDX41-208ENST00000507955 NCS1P62166 190 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 SPIBQ01892 262 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 CLCA4Q14CN2 919 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 DEPDC1Q5TB30 811 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 SZRD1Q7Z422 152 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 MFSD4AQ8N468 514 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 CPA6Q8N4T0 437 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 ZNF540Q8NDQ6 660 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 RPL3LQ92901 407 aaKnown RBP13.81□□□□□ -0.2
DDX41-208ENST00000507955 WFDC6Q9BQY6 131 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 WDR26Q9H7D7 661 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 CD93Q9NPY3 652 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 DAPK2Q9UIK4 370 aa13.81□□□□□ -0.2
DDX41-208ENST00000507955 NDRG4Q9ULP0 352 aaKnown RBP13.81□□□□□ -0.2
DDX41-208ENST00000507955 NME6O75414 186 aaPredicted RBP13.8□□□□□ -0.2
DDX41-208ENST00000507955 WBP4O75554 376 aaKnown RBP13.8□□□□□ -0.2
DDX41-208ENST00000507955 KRT20P35900 424 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 IL18R1Q13478 541 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 ZNF846Q147U1 533 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 EXOC3L2Q2M3D2 409 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 TRIM16LQ309B1 348 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 RFX4Q33E94 735 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 KIAA1614Q5VZ46 1190 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 YAF2Q8IY57 180 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 KRT78Q8N1N4 520 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 HORMAD2Q8N7B1 307 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 OR14C36Q8NHC7 312 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 SETD7Q8WTS6 366 aaKnown RBP13.8□□□□□ -0.2
DDX41-208ENST00000507955 APH1BQ8WW43 257 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 RORBQ92753 470 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 ZNF300Q96RE9 604 aaPredicted RBP13.8□□□□□ -0.2
DDX41-208ENST00000507955 AICDAQ9GZX7 198 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 KLHL31Q9H511 634 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 SYNPO2LQ9H987 977 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 BRWD1Q9NSI6 2320 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 TMEM221A6NGB7 291 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 BMP4P12644 408 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms