RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 KITP10721 976 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 ATP5A1P25705 553 aaKnown RBP9.47□□□□□ -0.89
NUP54-203ENST00000504173 BSGP35613 385 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 DCTP40126 519 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 TSFMP43897 325 aaKnown RBP9.47□□□□□ -0.89
NUP54-203ENST00000504173 ARFIP1P53367 373 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 RPS15P62841 145 aaKnown RBP9.47□□□□□ -0.89
NUP54-203ENST00000504173 GUCY1A3Q02108 690 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 OCA2Q04671 838 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 BTKQ06187 659 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 ACSM2AQ08AH3 577 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 TBL3Q12788 808 aaKnown RBP9.47□□□□□ -0.89
NUP54-203ENST00000504173 DNASE1L3Q13609 305 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 NR6A1Q15406 480 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 SYT16Q17RD7 645 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 SPIN4Q56A73 249 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 ACSM2BQ68CK6 577 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 CYP20A1Q6UW02 462 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 FAM47EQ6ZV65 393 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 OVCH1Q7RTY7 1134 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 COMMD6Q7Z4G1 85 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 VASH2Q86V25 355 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 METTL4Q8N3J2 472 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 ENDOVQ8N8Q3 282 aaKnown RBP9.47□□□□□ -0.89
NUP54-203ENST00000504173 AMER3Q8N944 861 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 ACOT4Q8N9L9 421 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 OR5T3Q8NGG3 340 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 OR51Q1Q8NH59 317 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 SSC4DQ8WTU2 575 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 C19orf60Q96EN9 201 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 APIPQ96GX9 242 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 C7orf26Q96N11 449 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 CCT7Q99832 543 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 NPLQ9BXD5 320 aaPredicted RBP9.47□□□□□ -0.89
NUP54-203ENST00000504173 ZNF717Q9BY31 904 aaPredicted RBP9.47□□□□□ -0.89
NUP54-203ENST00000504173 GPN2Q9H9Y4 310 aaPredicted RBP9.47□□□□□ -0.89
NUP54-203ENST00000504173 CLK4Q9HAZ1 481 aaKnown RBP9.47□□□□□ -0.89
NUP54-203ENST00000504173 SLCO1B3Q9NPD5 702 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 MKKSQ9NPJ1 570 aaPredicted RBP9.47□□□□□ -0.89
NUP54-203ENST00000504173 RIC8BQ9NVN3 520 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 ZNF282Q9UDV7 671 aaPredicted RBP9.47□□□□□ -0.89
NUP54-203ENST00000504173 KCND3Q9UK17 655 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 PADI2Q9Y2J8 665 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 SPACA6W5XKT8 324 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 MED13Q9UHV7 2174 aa9.46□□□□□ -0.89
NUP54-203ENST00000504173 TCP11X1B4DZS4 312 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 SLCO1B7G3V0H7 640 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 DNAJB6O75190 326 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 EEDO75530 441 aaKnown RBP9.46□□□□□ -0.9
NUP54-203ENST00000504173 MYO1DO94832 1006 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 SCELO95171 688 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 GBAP04062 536 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 KLK1P06870 262 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 CD63P08962 238 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 RAB40ALP0C0E4 278 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 RNH1P13489 461 aaKnown RBP9.46□□□□□ -0.9
NUP54-203ENST00000504173 LIFP15018 202 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 MDH1P40925 334 aaKnown RBP9.46□□□□□ -0.9
NUP54-203ENST00000504173 XCR1P46094 333 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 SLAMF1Q13291 335 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 RUNX2Q13950 521 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 NKG7Q16617 165 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 MRPL14Q6P1L8 145 aaKnown RBP9.46□□□□□ -0.9
NUP54-203ENST00000504173 RGS9BPQ6ZS82 235 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 PTRH1Q86Y79 214 aaKnown RBP9.46□□□□□ -0.9
NUP54-203ENST00000504173 ZC3H7AQ8IWR0 971 aaKnown RBP9.46□□□□□ -0.9
NUP54-203ENST00000504173 PRSS58Q8IYP2 241 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 CA13Q8N1Q1 262 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 ZCCHC7Q8N3Z6 543 aaKnown RBP9.46□□□□□ -0.9
NUP54-203ENST00000504173 C1orf52Q8N6N3 182 aaKnown RBP9.46□□□□□ -0.9
NUP54-203ENST00000504173 EFCAB3Q8N7B9 438 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 OR2T11Q8NH01 316 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 PIWIL2Q8TC59 973 aaKnown RBP9.46□□□□□ -0.9
NUP54-203ENST00000504173 STT3BQ8TCJ2 826 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 ADAMTS18Q8TE60 1221 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 MIEF2Q96C03 454 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 PEX11GQ96HA9 241 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 PPP1R36Q96LQ0 422 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 EFHD1Q9BUP0 239 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 GPR87Q9BY21 358 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 RBCK1Q9BYM8 510 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 NUF2Q9BZD4 464 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 SOX17Q9H6I2 414 aaPredicted RBP9.46□□□□□ -0.9
NUP54-203ENST00000504173 DDX31Q9H8H2 851 aaKnown RBP9.46□□□□□ -0.9
NUP54-203ENST00000504173 LRTM1Q9HBL6 345 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 LYRM4Q9HD34 91 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 C14orf105Q9NVL8 296 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 C1orf109Q9NX04 203 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 LYARQ9NX58 379 aaKnown RBP9.46□□□□□ -0.9
NUP54-203ENST00000504173 VTI1BQ9UEU0 232 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 TUBD1Q9UJT1 453 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 ADAM29Q9UKF5 820 aa9.46□□□□□ -0.9
NUP54-203ENST00000504173 NXT1Q9UKK6 140 aaKnown RBP9.46□□□□□ -0.9
NUP54-203ENST00000504173 FARSAQ9Y285 508 aaKnown RBP9.46□□□□□ -0.9
NUP54-203ENST00000504173 IGLV3-12A0A075B6K2 115 aa9.45□□□□□ -0.9
NUP54-203ENST00000504173 A0A0A6YYD5 115 aa9.45□□□□□ -0.9
NUP54-203ENST00000504173 ATP6AP2A0A1C7CYW4 349 aa9.45□□□□□ -0.9
NUP54-203ENST00000504173 GNG14A0A1W2PPG7 69 aa9.45□□□□□ -0.9
NUP54-203ENST00000504173 TRPC5OSA6NMA1 111 aa9.45□□□□□ -0.9
NUP54-203ENST00000504173 NPIPB8E9PQR5 432 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms