RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 TWIST2Q8WVJ9 160 aa10.46□□□□□ -0.74
APTX-230ENST00000494649 SNRNP27Q8WVK2 155 aaKnown RBP10.46□□□□□ -0.74
APTX-230ENST00000494649 APOBEC4Q8WW27 367 aaKnown RBP10.46□□□□□ -0.74
APTX-230ENST00000494649 THAP4Q8WY91 577 aa10.46□□□□□ -0.74
APTX-230ENST00000494649 OR1F2PQ96R84 312 aa10.46□□□□□ -0.74
APTX-230ENST00000494649 EML4Q9HC35 981 aaKnown RBP10.46□□□□□ -0.74
APTX-230ENST00000494649 MARCOQ9UEW3 520 aaPredicted RBP10.46□□□□□ -0.74
APTX-230ENST00000494649 TRAF6Q9Y4K3 522 aa10.46□□□□□ -0.74
APTX-230ENST00000494649 POLR3HQ9Y535 204 aaPredicted RBP10.46□□□□□ -0.74
APTX-230ENST00000494649 ATRXP46100 2492 aa10.46□□□□□ -0.74
APTX-230ENST00000494649 A0A1W2PS29 197 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 K7EM74 188 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 PIP5K1BO14986 540 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 BIRC5O15392 142 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 FAM58BPP0C7Q3 252 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 KITP10721 976 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 STX3Q13277 289 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 PDCD2Q16342 344 aaPredicted RBP10.45□□□□□ -0.74
APTX-230ENST00000494649 GALNTL6Q49A17 601 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 NIPAL1Q6NVV3 410 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 PCSK4Q6UW60 755 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 ANKRD37Q7Z713 158 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 GPR180Q86V85 440 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 METTL4Q8N3J2 472 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 OR6Y1Q8NGX8 325 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 TTC9Q92623 222 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 TRMOQ9BU70 441 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 DDX31Q9H8H2 851 aaKnown RBP10.45□□□□□ -0.74
APTX-230ENST00000494649 BRF2Q9HAW0 419 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 ZNF71Q9NQZ8 489 aaPredicted RBP10.45□□□□□ -0.74
APTX-230ENST00000494649 PRTFDC1Q9NRG1 225 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 PNO1Q9NRX1 252 aaKnown RBP10.45□□□□□ -0.74
APTX-230ENST00000494649 NSG1A0A0A6YYJ2 146 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 GNG14A0A1W2PPG7 69 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 A0A1W2PR48 441 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 AIFM1O95831 613 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 COX6A1P12074 109 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 ITGA3P26006 1051 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 PTGER1P34995 402 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 MAPK12P53778 367 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 ACSM2AQ08AH3 577 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 Q0VFX4 171 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 CSTF3Q12996 717 aaKnown RBP10.45□□□□□ -0.74
APTX-230ENST00000494649 TUBB8Q3ZCM7 444 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 SFT2D3Q587I9 215 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 ACSM2BQ68CK6 577 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 CLEC1AQ8NC01 280 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 CATSPER2Q96P56 530 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 BBC3Q96PG8 261 aaPredicted RBP10.45□□□□□ -0.74
APTX-230ENST00000494649 SORT1Q99523 831 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 NPLQ9BXD5 320 aaPredicted RBP10.45□□□□□ -0.74
APTX-230ENST00000494649 SEMA4CQ9C0C4 833 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 ROGDIQ9GZN7 287 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 PNPOQ9NVS9 261 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 ASB4Q9Y574 426 aa10.45□□□□□ -0.74
APTX-230ENST00000494649 IGHV1-45A0A0A0MS14 117 aa10.44□□□□□ -0.74
APTX-230ENST00000494649 HMGB1P1B2RPK0 211 aaPredicted RBP10.44□□□□□ -0.74
APTX-230ENST00000494649 PGRMC2O15173 223 aa10.44□□□□□ -0.74
APTX-230ENST00000494649 PCDH7O60245 1069 aa10.44□□□□□ -0.74
APTX-230ENST00000494649 FGF17O60258 216 aa10.44□□□□□ -0.74
APTX-230ENST00000494649 SEMA3DO95025 777 aa10.44□□□□□ -0.74
APTX-230ENST00000494649 SCELO95171 688 aa10.44□□□□□ -0.74
APTX-230ENST00000494649 CHEK2O96017 543 aa10.44□□□□□ -0.74
APTX-230ENST00000494649 IFNA16P05015 189 aa10.44□□□□□ -0.74
APTX-230ENST00000494649 ALDH9A1P49189 494 aa10.44□□□□□ -0.74
APTX-230ENST00000494649 OR4D2P58180 307 aa10.44□□□□□ -0.74
APTX-230ENST00000494649 NAA20P61599 178 aa10.44□□□□□ -0.74
APTX-230ENST00000494649 RAE1P78406 368 aaKnown RBP10.44□□□□□ -0.74
APTX-230ENST00000494649 NR6A1Q15406 480 aa10.44□□□□□ -0.74
APTX-230ENST00000494649 ZNF750Q32MQ0 723 aa10.44□□□□□ -0.74
APTX-230ENST00000494649 UGT3A2Q3SY77 523 aa10.44□□□□□ -0.74
APTX-230ENST00000494649 CRTC2Q53ET0 693 aaPredicted RBP10.44□□□□□ -0.74
APTX-230ENST00000494649 CPEB2Q7Z5Q1 589 aaKnown RBP10.44□□□□□ -0.74
APTX-230ENST00000494649 CLYBLQ8N0X4 340 aa10.44□□□□□ -0.74
APTX-230ENST00000494649 ZCCHC7Q8N3Z6 543 aaKnown RBP10.44□□□□□ -0.74
APTX-230ENST00000494649 EXD3Q8N9H8 876 aa10.44□□□□□ -0.74
APTX-230ENST00000494649 FDCSPQ8NFU4 85 aa10.44□□□□□ -0.74
APTX-230ENST00000494649 PPWD1Q96BP3 646 aaKnown RBP10.44□□□□□ -0.74
APTX-230ENST00000494649 ABHD17AQ96GS6 310 aa10.44□□□□□ -0.74
APTX-230ENST00000494649 C3orf30Q96M34 536 aa10.44□□□□□ -0.74
APTX-230ENST00000494649 RPF2Q9H7B2 306 aaKnown RBP10.44□□□□□ -0.74
APTX-230ENST00000494649 LYRM4Q9HD34 91 aa10.44□□□□□ -0.74
APTX-230ENST00000494649 PRDM9Q9NQV7 894 aa10.44□□□□□ -0.74
APTX-230ENST00000494649 AHSPQ9NZD4 102 aa10.44□□□□□ -0.74
APTX-230ENST00000494649 SPACA6W5XKT8 324 aa10.44□□□□□ -0.74
APTX-230ENST00000494649 IGSF10Q6WRI0 2623 aa10.43□□□□□ -0.74
APTX-230ENST00000494649 CLDN4O14493 209 aa10.43□□□□□ -0.74
APTX-230ENST00000494649 PROM1O43490 865 aa10.43□□□□□ -0.74
APTX-230ENST00000494649 PEX11AO75192 247 aa10.43□□□□□ -0.74
APTX-230ENST00000494649 SEC22BO75396 215 aa10.43□□□□□ -0.74
APTX-230ENST00000494649 MYO1DO94832 1006 aa10.43□□□□□ -0.74
APTX-230ENST00000494649 PRB1P04280 392 aa10.43□□□□□ -0.74
APTX-230ENST00000494649 RPL38P63173 70 aaKnown RBP10.43□□□□□ -0.74
APTX-230ENST00000494649 TNFRSF17Q02223 184 aa10.43□□□□□ -0.74
APTX-230ENST00000494649 FOLH1Q04609 750 aa10.43□□□□□ -0.74
APTX-230ENST00000494649 ACTN3Q08043 901 aaPredicted RBP10.43□□□□□ -0.74
APTX-230ENST00000494649 STX4Q12846 297 aa10.43□□□□□ -0.74
APTX-230ENST00000494649 PCOLCEQ15113 449 aa10.43□□□□□ -0.74
APTX-230ENST00000494649 BTBD16Q32M84 506 aa10.43□□□□□ -0.74
APTX-230ENST00000494649 NDUFAF5Q5TEU4 345 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms