RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 SLCO2A1Q92959 643 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 SARAFQ96BY9 339 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 PWWP2AQ96N64 755 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 EGFL8Q99944 293 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 CNPPD1Q9BV87 410 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 OR8D2Q9GZM6 311 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 GSX1Q9H4S2 264 aaPredicted RBP17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 PLAC1Q9HBJ0 212 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 PPANQ9NQ55 473 aaKnown RBP17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 RASSF1Q9NS23 344 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 SACM1LQ9NTJ5 587 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 TUBA8Q9NY65 449 aaPredicted RBP17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 PLEKHA6Q9Y2H5 1048 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 NIPBLQ6KC79 2804 aaeCLIP17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 CTNSO60931 367 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 H2AFYO75367 372 aaKnown RBP17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 WDR47O94967 919 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 TBX6O95947 436 aaPredicted RBP17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 CCL3P10147 92 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 ZNF37AP17032 561 aaPredicted RBP17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 GNAZP19086 355 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 ENDOUP21128 410 aaKnown RBP17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 CERS1P27544 350 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 KIR2DL3P43628 341 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 LIM2P55344 173 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 CDKL1Q00532 357 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 SLC10A1Q14973 349 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 C18orf21Q32NC0 220 aaPredicted RBP17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 ADPRMQ3LIE5 342 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 WLSQ5T9L3 541 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 OR2L5Q8NG80 312 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 OR14A16Q8NHC5 309 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 RMND5BQ96G75 393 aaPredicted RBP17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 PBKQ96KB5 322 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 SGCZQ96LD1 299 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 SERINC2Q96SA4 455 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 NAT9Q9BTE0 207 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 LDAHQ9H6V9 325 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 SEMA4BQ9NPR2 832 aaPredicted RBP17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 DLL4Q9NR61 685 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 CRIM1Q9NZV1 1036 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 SPRR3Q9UBC9 169 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 VTI1BQ9UEU0 232 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 DAPP1Q9UN19 280 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 ATG4BQ9Y4P1 393 aa17.98■□□□□ 0.47
SMPDL3A-202ENST00000487215 DNAJC13O75165 2243 aa17.97■□□□□ 0.47
SMPDL3A-202ENST00000487215 PROM1O43490 865 aa17.97■□□□□ 0.47
SMPDL3A-202ENST00000487215 CLEC3AO75596 197 aa17.97■□□□□ 0.47
SMPDL3A-202ENST00000487215 P04436 131 aa17.97■□□□□ 0.47
SMPDL3A-202ENST00000487215 DNASE1P24855 282 aa17.97■□□□□ 0.47
SMPDL3A-202ENST00000487215 GSTM2P28161 218 aa17.97■□□□□ 0.47
SMPDL3A-202ENST00000487215 GDF5P43026 501 aa17.97■□□□□ 0.47
SMPDL3A-202ENST00000487215 SLC6A12P48065 614 aa17.97■□□□□ 0.47
SMPDL3A-202ENST00000487215 MTTPP55157 894 aa17.97■□□□□ 0.47
SMPDL3A-202ENST00000487215 RNF4P78317 190 aa17.97■□□□□ 0.47
SMPDL3A-202ENST00000487215 RIPPLY2Q5TAB7 128 aa17.97■□□□□ 0.47
SMPDL3A-202ENST00000487215 TRIM40Q6P9F5 258 aa17.97■□□□□ 0.47
SMPDL3A-202ENST00000487215 OPN5Q6U736 354 aa17.97■□□□□ 0.47
SMPDL3A-202ENST00000487215 VN1R5Q7Z5H4 357 aa17.97■□□□□ 0.47
SMPDL3A-202ENST00000487215 OR8K3Q8NH51 312 aa17.97■□□□□ 0.47
SMPDL3A-202ENST00000487215 ALOXE3Q9BYJ1 711 aa17.97■□□□□ 0.47
SMPDL3A-202ENST00000487215 REXO4Q9GZR2 422 aaKnown RBP17.97■□□□□ 0.47
SMPDL3A-202ENST00000487215 ALKBH4Q9NXW9 302 aa17.97■□□□□ 0.47
SMPDL3A-202ENST00000487215 OARD1Q9Y530 152 aa17.97■□□□□ 0.47
SMPDL3A-202ENST00000487215 TRGV5A0A0B4J1U4 118 aa17.96■□□□□ 0.47
SMPDL3A-202ENST00000487215 FAM47E-STBD1D6RA91 191 aa17.96■□□□□ 0.47
SMPDL3A-202ENST00000487215 HCN1O60741 890 aa17.96■□□□□ 0.47
SMPDL3A-202ENST00000487215 FAM155BO75949 473 aa17.96■□□□□ 0.47
SMPDL3A-202ENST00000487215 HNMTP50135 292 aa17.96■□□□□ 0.47
SMPDL3A-202ENST00000487215 STX4Q12846 297 aa17.96■□□□□ 0.47
SMPDL3A-202ENST00000487215 ADNP2Q6IQ32 1131 aa17.96■□□□□ 0.47
SMPDL3A-202ENST00000487215 ABHD17CQ6PCB6 329 aa17.96■□□□□ 0.47
SMPDL3A-202ENST00000487215 TRMT10BQ6PF06 316 aaKnown RBP17.96■□□□□ 0.47
SMPDL3A-202ENST00000487215 CDC20BQ86Y33 519 aa17.96■□□□□ 0.47
SMPDL3A-202ENST00000487215 KRT78Q8N1N4 520 aa17.96■□□□□ 0.47
SMPDL3A-202ENST00000487215 OR5L2Q8NGL0 311 aa17.96■□□□□ 0.47
SMPDL3A-202ENST00000487215 SLC2A12Q8TD20 617 aa17.96■□□□□ 0.47
SMPDL3A-202ENST00000487215 ANKRD7Q92527 254 aa17.96■□□□□ 0.47
SMPDL3A-202ENST00000487215 ALPK1Q96QP1 1244 aa17.96■□□□□ 0.47
SMPDL3A-202ENST00000487215 EXO5Q9H790 373 aa17.96■□□□□ 0.47
SMPDL3A-202ENST00000487215 NT5DC2Q9H857 520 aa17.96■□□□□ 0.47
SMPDL3A-202ENST00000487215 COPS7BQ9H9Q2 264 aaPredicted RBP17.96■□□□□ 0.47
SMPDL3A-202ENST00000487215 B4GALT7Q9UBV7 327 aa17.96■□□□□ 0.47
SMPDL3A-202ENST00000487215 PPP2R2CQ9Y2T4 447 aa17.96■□□□□ 0.47
SMPDL3A-202ENST00000487215 JRKLQ9Y4A0 524 aa17.96■□□□□ 0.47
SMPDL3A-202ENST00000487215 NAV3Q8IVL0 2385 aa17.95■□□□□ 0.46
SMPDL3A-202ENST00000487215 ANKDD1BA6NHY2 528 aa17.95■□□□□ 0.46
SMPDL3A-202ENST00000487215 C17orf105B2RV13 164 aa17.95■□□□□ 0.46
SMPDL3A-202ENST00000487215 DNALI1O14645 258 aaPredicted RBP17.95■□□□□ 0.46
SMPDL3A-202ENST00000487215 DRD2P14416 443 aa17.95■□□□□ 0.46
SMPDL3A-202ENST00000487215 GABRA1P14867 456 aa17.95■□□□□ 0.46
SMPDL3A-202ENST00000487215 TNNI3P19429 210 aa17.95■□□□□ 0.46
SMPDL3A-202ENST00000487215 UQCRC1P31930 480 aa17.95■□□□□ 0.46
SMPDL3A-202ENST00000487215 PIGAP37287 484 aa17.95■□□□□ 0.46
SMPDL3A-202ENST00000487215 RCN2Q14257 317 aa17.95■□□□□ 0.46
SMPDL3A-202ENST00000487215 ZNF460Q14592 562 aa17.95■□□□□ 0.46
SMPDL3A-202ENST00000487215 EFTUD2Q15029 972 aaKnown RBP eCLIP17.95■□□□□ 0.46
SMPDL3A-202ENST00000487215 NKAPQ8N5F7 415 aaKnown RBP17.95■□□□□ 0.46
SMPDL3A-202ENST00000487215 RELL2Q8NC24 303 aaPredicted RBP17.95■□□□□ 0.46
SMPDL3A-202ENST00000487215 GRK7Q8WTQ7 553 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms