RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 ARHGAP17Q68EM7 881 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 CUZD1Q86UP6 607 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 HOGA1Q86XE5 327 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 SERPINA12Q8IW75 414 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 PEX5LQ8IYB4 626 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 LSMEM2Q8N112 164 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 THEM5Q8N1Q8 247 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 CHCHD4Q8N4Q1 142 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 SMAP2Q8WU79 429 aaPredicted RBP4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 GATAD1Q8WUU5 269 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 GAL3ST4Q96RP7 486 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 FUCA2Q9BTY2 467 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 NAPBQ9H115 298 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 EXOC1Q9NV70 894 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 COMMD8Q9NX08 183 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 CYP39A1Q9NYL5 469 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 POLKQ9UBT6 870 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 MAD2L2Q9UI95 211 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 WDR37Q9Y2I8 494 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 CCDC162PA2VCL2 907 aa4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 ZNF732B4DXR9 585 aa4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 RTCAO00442 366 aaKnown RBP4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 SP1P08047 785 aa4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 CPA3P15088 417 aa4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 STMN1P16949 149 aa4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 CEBPBP17676 345 aa4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 XGP55808 180 aa4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 SLC3A1Q07837 685 aa4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 SRSF9Q13242 221 aaKnown RBP eCLIP4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 HNRNPDQ14103 355 aaKnown RBP4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 LRRC37A5PQ49AS3 106 aa4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 C9orf50Q5SZB4 431 aa4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 USP43Q70EL4 1123 aa4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 TRMT11Q7Z4G4 463 aaKnown RBP4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 KLHDC8BQ8IXV7 354 aa4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 SEPT8Q92599 483 aa4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 GGHQ92820 318 aa4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 ZNF486Q96H40 463 aaPredicted RBP4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 MAGED4Q96JG8 741 aa4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 C2orf48Q96LS8 159 aa4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 MAGEF1Q9HAY2 307 aa4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 C2orf42Q9NWW7 574 aa4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 MOSPD1Q9UJG1 213 aa4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 APPL1Q9UKG1 709 aa4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 SATB2Q9UPW6 733 aa4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 EXOC6BQ9Y2D4 811 aa4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 ANGPTL3Q9Y5C1 460 aa4.33□□□□□ -1.72
PRPF38A-203ENST00000487160 MAP2P11137 1827 aaKnown RBP4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 C4AP0C0L4 1744 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 NSD2O96028 1365 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 A0A087WZ39 114 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 A0A1W2PR80 420 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 AADACP22760 399 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 NT5C2P49902 561 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 CLCN4P51793 760 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 PAX9P55771 341 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 ITGA9Q13797 1035 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 PDE7AQ13946 482 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 STXBP2Q15833 593 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 CCDC6Q16204 474 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 SLC27A4Q6P1M0 643 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 MACC1Q6ZN28 852 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 C17orf107Q6ZR85 190 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 Q6ZSR9 355 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 FAM43BQ6ZT52 329 aaPredicted RBP4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 C15orf52Q6ZUT6 534 aaKnown RBP4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 RAB42Q8N4Z0 105 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 TMEM99Q8N816 258 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 RTL3Q8N8U3 475 aaKnown RBP4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 DDHD1Q8NEL9 900 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 ZNRF4Q8WWF5 429 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 CCDC47Q96A33 483 aaKnown RBP4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 FBXO17Q96EF6 278 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 CFAP36Q96G28 342 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 GMPPAQ96IJ6 420 aaPredicted RBP4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 DDX50Q9BQ39 737 aaKnown RBP4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 TDRD1Q9BXT4 1180 aaKnown RBP4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 TRIM7Q9C029 511 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 FETUBQ9UGM5 382 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 PSORS1C1Q9UIG5 152 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 PYGO1Q9Y3Y4 419 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 SELENOKQ9Y6D0 94 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 TEX264Q9Y6I9 313 aa4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 VIRMAQ69YN4 1812 aaKnown RBP4.32□□□□□ -1.72
PRPF38A-203ENST00000487160 KCPQ6ZWJ8 1503 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 ANKRD36BQ8N2N9 1353 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 TNRC18O15417 2968 aaPredicted RBP4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 C2orf92A0A1B0GVN3 265 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 TMEM129A0AVI4 362 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 GLTPD2A6NH11 291 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 IKBKBO14920 756 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 MAGEB2O15479 319 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 ZBTB14O43829 449 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 GJB2P29033 226 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 SNRPD1P62314 119 aaKnown RBP4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 BTG1P62324 171 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 EFTUD2Q15029 972 aaKnown RBP eCLIP4.31□□□□□ -1.722e-8■■■■■ 57.6
PRPF38A-203ENST00000487160 ATP1A1-AS1Q5TC04 95 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 RAB12Q6IQ22 244 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 PWWP2BQ6NUJ5 590 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms