RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 LOC100130705A0A1B0GUX0 176 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 ISM1B1AKI9 464 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 TDGQ13569 410 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 MLC1Q15049 377 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 IFI44LQ53G44 452 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 RBM48Q5RL73 367 aaKnown RBP19.35■□□□□ 0.69
HPS3-206ENST00000486530 KDM4DQ6B0I6 523 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 ZNF425Q6IV72 752 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 FAM180BQ6P0A1 224 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 ZNF793Q6ZN11 406 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 MFSD9Q8NBP5 474 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 MS4A6EQ96DS6 147 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 KCNC2Q96PR1 638 aa19.35■□□□□ 0.69
HPS3-206ENST00000486530 THUMPD1Q9NXG2 353 aaKnown RBP19.35■□□□□ 0.69
HPS3-206ENST00000486530 TOR1BO14657 336 aa19.34■□□□□ 0.69
HPS3-206ENST00000486530 C9P02748 559 aa19.34■□□□□ 0.69
HPS3-206ENST00000486530 CDH2P19022 906 aaPredicted RBP19.34■□□□□ 0.69
HPS3-206ENST00000486530 ELK4P28324 431 aa19.34■□□□□ 0.69
HPS3-206ENST00000486530 PCBP3P57721 371 aaKnown RBP19.34■□□□□ 0.69
HPS3-206ENST00000486530 SRP54P61011 504 aaKnown RBP19.34■□□□□ 0.69
HPS3-206ENST00000486530 ESRRGP62508 458 aa19.34■□□□□ 0.69
HPS3-206ENST00000486530 HYAL2Q12891 473 aa19.34■□□□□ 0.69
HPS3-206ENST00000486530 SLC9A5Q14940 896 aa19.34■□□□□ 0.69
HPS3-206ENST00000486530 KIAA1614Q5VZ46 1190 aa19.34■□□□□ 0.69
HPS3-206ENST00000486530 ZC3H7AQ8IWR0 971 aaKnown RBP19.34■□□□□ 0.69
HPS3-206ENST00000486530 PIK3C3Q8NEB9 887 aa19.34■□□□□ 0.69
HPS3-206ENST00000486530 SPPL2AQ8TCT8 520 aa19.34■□□□□ 0.69
HPS3-206ENST00000486530 HDAC2Q92769 488 aaKnown RBP19.34■□□□□ 0.69
HPS3-206ENST00000486530 HLA-CQ95604 372 aa19.34■□□□□ 0.69
HPS3-206ENST00000486530 TAMM41Q96BW9 452 aa19.34■□□□□ 0.69
HPS3-206ENST00000486530 BARD1Q99728 777 aaKnown RBP19.34■□□□□ 0.69
HPS3-206ENST00000486530 PAPOLBQ9NRJ5 636 aaKnown RBP19.34■□□□□ 0.69
HPS3-206ENST00000486530 PDP1Q9P0J1 537 aaPredicted RBP19.34■□□□□ 0.69
HPS3-206ENST00000486530 ZNF624Q9P2J8 865 aaPredicted RBP19.34■□□□□ 0.69
HPS3-206ENST00000486530 KLF15Q9UIH9 416 aa19.34■□□□□ 0.69
HPS3-206ENST00000486530 PCDHGA4Q9Y5G9 962 aa19.34■□□□□ 0.69
HPS3-206ENST00000486530 CEPT1Q9Y6K0 416 aa19.34■□□□□ 0.69
HPS3-206ENST00000486530 A0A0G2JN53 185 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 ERI3O43414 337 aaKnown RBP19.33■□□□□ 0.69
HPS3-206ENST00000486530 RASGRP1O95267 797 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 SEMA4FO95754 770 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 OPN1SWP03999 348 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 ETS2P15036 469 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 TSFMP43897 325 aaKnown RBP19.33■□□□□ 0.69
HPS3-206ENST00000486530 RPS6KA3P51812 740 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 HSPB3Q12988 150 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 TMEM31Q5JXX7 168 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 NDUFAF5Q5TEU4 345 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 ZNF691Q5VV52 312 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 SLC30A9Q6PML9 568 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 CEACAM20Q6UY09 585 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 CYP4Z1Q86W10 505 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 GALNT15Q8N3T1 639 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 DEFB123Q8N688 67 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 AMER3Q8N944 861 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 SRFBP1Q8NEF9 429 aaKnown RBP19.33■□□□□ 0.69
HPS3-206ENST00000486530 OR2L5Q8NG80 312 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 OR4E2Q8NGC2 313 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 PSMA8Q8TAA3 256 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 HMGB4Q8WW32 186 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 JPH3Q8WXH2 748 aaPredicted RBP19.33■□□□□ 0.69
HPS3-206ENST00000486530 SLC22A18Q96BI1 424 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 TMEM168Q9H0V1 697 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 KLHL31Q9H511 634 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 RUBCNLQ9H714 662 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 TRNAU1APQ9NX07 287 aaKnown RBP19.33■□□□□ 0.69
HPS3-206ENST00000486530 PTTG2Q9NZH5 202 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 USP36Q9P275 1121 aaKnown RBP19.33■□□□□ 0.69
HPS3-206ENST00000486530 C5AR2Q9P296 337 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 NDRG2Q9UN36 371 aaKnown RBP19.33■□□□□ 0.69
HPS3-206ENST00000486530 PCDHGA8Q9Y5G5 932 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 PCDHGA2Q9Y5H1 932 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 HS3ST3A1Q9Y663 406 aa19.33■□□□□ 0.69
HPS3-206ENST00000486530 A6NCN8 305 aa19.33■□□□□ 0.68
HPS3-206ENST00000486530 ADAMDEC1O15204 470 aa19.33■□□□□ 0.68
HPS3-206ENST00000486530 PPM1DO15297 605 aa19.33■□□□□ 0.68
HPS3-206ENST00000486530 UGT2B11O75310 529 aa19.33■□□□□ 0.68
HPS3-206ENST00000486530 GUCY1B2O75343 617 aa19.33■□□□□ 0.68
HPS3-206ENST00000486530 F3P13726 295 aa19.33■□□□□ 0.68
HPS3-206ENST00000486530 HOXB3P14651 431 aaPredicted RBP19.33■□□□□ 0.68
HPS3-206ENST00000486530 HIST1H1TP22492 207 aaPredicted RBP19.33■□□□□ 0.68
HPS3-206ENST00000486530 DAPP51397 102 aa19.33■□□□□ 0.68
HPS3-206ENST00000486530 TOR1AIP1Q5JTV8 583 aa19.33■□□□□ 0.68
HPS3-206ENST00000486530 ABHD17CQ6PCB6 329 aa19.33■□□□□ 0.68
HPS3-206ENST00000486530 CCL4L1Q8NHW4 92 aa19.33■□□□□ 0.68
HPS3-206ENST00000486530 NMD3Q96D46 503 aaKnown RBP19.33■□□□□ 0.68
HPS3-206ENST00000486530 ZNF347Q96SE7 839 aa19.33■□□□□ 0.68
HPS3-206ENST00000486530 SRMSQ9H3Y6 488 aa19.33■□□□□ 0.68
HPS3-206ENST00000486530 A4GALTQ9NPC4 353 aa19.33■□□□□ 0.68
HPS3-206ENST00000486530 SIRT3Q9NTG7 399 aaPredicted RBP19.33■□□□□ 0.68
HPS3-206ENST00000486530 ZSCAN32Q9NX65 697 aa19.33■□□□□ 0.68
HPS3-206ENST00000486530 KIF17Q9P2E2 1029 aa19.33■□□□□ 0.68
HPS3-206ENST00000486530 PCDHGB3Q9Y5G1 929 aa19.33■□□□□ 0.68
HPS3-206ENST00000486530 PRUNE2Q8WUY3 3088 aa19.32■□□□□ 0.68
HPS3-206ENST00000486530 ENO4A6NNW6 628 aa19.32■□□□□ 0.68
HPS3-206ENST00000486530 C10orf142B7Z368 130 aa19.32■□□□□ 0.68
HPS3-206ENST00000486530 M0QX08 132 aa19.32■□□□□ 0.68
HPS3-206ENST00000486530 BCKDKO14874 412 aa19.32■□□□□ 0.68
HPS3-206ENST00000486530 JRKO75564 520 aa19.32■□□□□ 0.68
HPS3-206ENST00000486530 LAPTM4AQ15012 233 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms