RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 MARVELD2Q8N4S9 558 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 CCDC185Q8N715 623 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 FADS6Q8N9I5 356 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 OR4L1Q8NH43 312 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 OR1L3Q8NH93 324 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 CD99L2Q8TCZ2 262 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 FCAMRQ8WWV6 532 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 SHC3Q92529 594 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 SLC35C1Q96A29 364 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 CCDC51Q96ER9 411 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 IGSF21Q96ID5 467 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 NEDD4LQ96PU5 975 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 FUNDC2Q9BWH2 189 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 NACA2Q9H009 215 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 CD93Q9NPY3 652 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 FARSBQ9NSD9 589 aaKnown RBP4.01□□□□□ -1.77
VPS13A-211ENST00000484581 ZNF319Q9P2F9 582 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 ATXN10Q9UBB4 475 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 POLKQ9UBT6 870 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 DBF4Q9UBU7 674 aaPredicted RBP4.01□□□□□ -1.77
VPS13A-211ENST00000484581 MRTO4Q9UKD2 239 aaKnown RBP4.01□□□□□ -1.77
VPS13A-211ENST00000484581 FAF1Q9UNN5 650 aaPredicted RBP4.01□□□□□ -1.77
VPS13A-211ENST00000484581 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.01□□□□□ -1.77
VPS13A-211ENST00000484581 DOCK7Q96N67 2140 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 TNFSF12-TNFSF13A0A0A6YY99 330 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 SNURFLB1AK76 121 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 CCSO14618 274 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 MAPK13O15264 365 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 CSO75390 466 aaKnown RBP4□□□□□ -1.77
VPS13A-211ENST00000484581 SPAG6O75602 509 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 PALMO75781 387 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 TXNDC12O95881 172 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 RRASP10301 218 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 EZRP15311 586 aaKnown RBP4□□□□□ -1.77
VPS13A-211ENST00000484581 HNRNPA2B1P22626 353 aaKnown RBP4□□□□□ -1.77
VPS13A-211ENST00000484581 IL4RP24394 825 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 ACTR1AP61163 376 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 TMEM132DQ14C87 1099 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 EXOSC7Q15024 291 aaKnown RBP4□□□□□ -1.77
VPS13A-211ENST00000484581 ATAD3BQ5T9A4 648 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 TMEM207Q6UWW9 146 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 LEKR1Q6ZMV7 388 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 FOXL2NBQ6ZUU3 175 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 TRMT1LQ7Z2T5 733 aaKnown RBP4□□□□□ -1.77
VPS13A-211ENST00000484581 C16orf82Q7Z2V1 217 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 C17orf64Q86WR6 236 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 CENPLQ8N0S6 344 aaPredicted RBP4□□□□□ -1.77
VPS13A-211ENST00000484581 ELMOD1Q8N336 334 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 CCDC197Q8NCU1 140 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 KBTBD8Q8NFY9 601 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 CASP10Q92851 521 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 NCLNQ969V3 563 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 TMEM143Q96AN5 459 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 TMEM45BQ96B21 275 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 NXPE2Q96DL1 559 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 ZNF479Q96JC4 524 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 CXorf58Q96LI9 332 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 DUX5Q96PT3 197 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 ZPBPQ9BS86 351 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 RAB33BQ9H082 229 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 SLC26A1Q9H2B4 701 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 DDX31Q9H8H2 851 aaKnown RBP4□□□□□ -1.77
VPS13A-211ENST00000484581 S100A14Q9HCY8 104 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 SLC52A3Q9NQ40 469 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 HACD3Q9P035 362 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 BCAP29Q9UHQ4 241 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 OR1A2Q9Y585 309 aa4□□□□□ -1.77
VPS13A-211ENST00000484581 DDX49Q9Y6V7 483 aaKnown RBP4□□□□□ -1.77
VPS13A-211ENST00000484581 ABCC4O15439 1325 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 A0A087WZ39 114 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 TRBV4-1A0A0J9YWV2 114 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 A0A0U1RQV5 110 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 A0A1B0GUL7 405 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 PLSCR5A0PG75 271 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 NKX6-3A6NJ46 265 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 SRRM4A7MD48 611 aaKnown RBP3.99□□□□□ -1.77
VPS13A-211ENST00000484581 PDXKO00764 312 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 KLF11O14901 512 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 P2RX6O15547 441 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 TLX2O43763 284 aaPredicted RBP3.99□□□□□ -1.77
VPS13A-211ENST00000484581 EXTL3O43909 919 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 MFN2O95140 757 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 PRAMEF12O95522 483 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 GPIP06744 558 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 NGFRP08138 427 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 HIST1H2AGP0C0S8 130 aaPredicted RBP3.99□□□□□ -1.77
VPS13A-211ENST00000484581 ZCCHC18P0CG32 403 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 TNNI3P19429 210 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 PSMA5P28066 241 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 CEACAM8P31997 349 aaPredicted RBP3.99□□□□□ -1.77
VPS13A-211ENST00000484581 DCTP40126 519 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 LBX1P52954 281 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 DRP2Q13474 957 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 ZNF74Q16587 644 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 ZNF528Q3MIS6 628 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 RTL6Q6ICC9 239 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 SULT1C3Q6IMI6 304 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 CAPN13Q6MZZ7 669 aaPredicted RBP3.99□□□□□ -1.77
VPS13A-211ENST00000484581 CDC42EP5Q6NZY7 148 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms