RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 TMPRSS3P57727 454 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 CLDN2P57739 230 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 RPS21P63220 83 aaKnown RBP6.26□□□□□ -1.41
CLK1-212ENST00000482590 IQCB1Q15051 598 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 STK11Q15831 433 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 ZNF284Q2VY69 593 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 SLC25A52Q3SY17 297 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 ZIK1Q3SY52 487 aaPredicted RBP6.26□□□□□ -1.41
CLK1-212ENST00000482590 TAF1BQ53T94 588 aaPredicted RBP6.26□□□□□ -1.41
CLK1-212ENST00000482590 C6orf136Q5SQH8 315 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 SEL1L3Q68CR1 1132 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 NHLRC1Q6VVB1 395 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 Q6ZNX1 250 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 DPY19L3Q6ZPD9 716 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 BNIPLQ7Z465 357 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 ABI3BPQ7Z7G0 1075 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 ERICH1Q86X53 443 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 DDIASQ8IXT1 998 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 CCDC13Q8IYE1 715 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 SLC22A18ASQ8N1D0 253 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 SLC25A45Q8N413 288 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 NIPA2Q8N8Q9 360 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 MCUQ8NE86 351 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 ZNF548Q8NEK5 533 aaPredicted RBP6.26□□□□□ -1.41
CLK1-212ENST00000482590 TSPAN14Q8NG11 270 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 OR52E1Q8NGJ3 308 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 SUN5Q8TC36 379 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 TEKT4Q8WW24 435 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 ARHGEF26Q96DR7 871 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 MMABQ96EY8 250 aaPredicted RBP6.26□□□□□ -1.41
CLK1-212ENST00000482590 HIST1H2AAQ96QV6 131 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 IL12RB2Q99665 862 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 SEMA3CQ99985 751 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 CARD6Q9BX69 1037 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 TLR10Q9BXR5 811 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 TM6SF2Q9BZW4 377 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 ZYG11BQ9C0D3 744 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 CLPBQ9H078 707 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 TFB2MQ9H5Q4 396 aaKnown RBP6.26□□□□□ -1.41
CLK1-212ENST00000482590 SYNDIG1Q9H7V2 258 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 GORASP2Q9H8Y8 452 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 KCNK9Q9NPC2 374 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 THSD1Q9NS62 852 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 TMEM184CQ9NVA4 438 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 FBXW2Q9UKT8 454 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 PSME2Q9UL46 239 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 SHOC2Q9UQ13 582 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 SNX10Q9Y5X0 201 aa6.26□□□□□ -1.41
CLK1-212ENST00000482590 TENM4Q6N022 2769 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 ASH1LQ9NR48 2969 aaKnown RBP6.25□□□□□ -1.41
CLK1-212ENST00000482590 FLNBO75369 2602 aaKnown RBP6.25□□□□□ -1.41
CLK1-212ENST00000482590 IGLV3-10A0A075B6K4 115 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 ILVBLA1L0T0 632 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 CPED1A4D0V7 1026 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 AQP9O43315 295 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 ERLIN1O75477 346 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 NEBLO76041 1014 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 SEC31AO94979 1220 aaKnown RBP6.25□□□□□ -1.41
CLK1-212ENST00000482590 PAK4O96013 591 aaPredicted RBP6.25□□□□□ -1.41
CLK1-212ENST00000482590 AK1P00568 194 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 MT-ATP6P00846 226 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 CYP11B1P15538 503 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 ACHEP22303 614 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 GALP22466 123 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 JAK1P23458 1154 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 SDC4P31431 198 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 CDH5P33151 784 aaPredicted RBP6.25□□□□□ -1.41
CLK1-212ENST00000482590 HTR7P34969 479 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 TAGLN2P37802 199 aaKnown RBP6.25□□□□□ -1.41
CLK1-212ENST00000482590 RPL15P61313 204 aaKnown RBP6.25□□□□□ -1.41
CLK1-212ENST00000482590 SNRPD1P62314 119 aaKnown RBP6.25□□□□□ -1.41
CLK1-212ENST00000482590 GNA12Q03113 381 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 TLE3Q04726 772 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 SCGB2A2Q13296 93 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 DPYSL2Q16555 572 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 CAMK4Q16566 473 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 CDO1Q16878 200 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 P3H1Q32P28 736 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 SPDYE7PQ495Y7 208 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 FILIP1LQ4L180 1135 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 TDRD12Q587J7 1177 aaKnown RBP6.25□□□□□ -1.41
CLK1-212ENST00000482590 RUNDC3AQ59EK9 446 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 ZNF542PQ5EBM4 170 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 CARD16Q5EG05 197 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 ZNF789Q5FWF6 425 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 CCDC122Q5T0U0 273 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 ATAD3BQ5T9A4 648 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 TAF3Q5VWG9 929 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 RWDD4Q6NW29 188 aaKnown RBP6.25□□□□□ -1.41
CLK1-212ENST00000482590 Q6ZSR6 202 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 EFL1Q7Z2Z2 1120 aaKnown RBP6.25□□□□□ -1.41
CLK1-212ENST00000482590 SYVN1Q86TM6 617 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 FAM131BQ86XD5 332 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 SRRM1Q8IYB3 904 aaKnown RBP6.25□□□□□ -1.41
CLK1-212ENST00000482590 SIRT6Q8N6T7 355 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 OR13C2Q8NGS9 318 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 LRRC8CQ8TDW0 803 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 CNOT9Q92600 299 aaKnown RBP6.25□□□□□ -1.41
CLK1-212ENST00000482590 SLAMF9Q96A28 289 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 OR2A14Q96R47 310 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms