RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 PLD4Q96BZ4 506 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 LRR1Q96L50 414 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 KCNK12Q9HB15 430 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 DKK3Q9UBP4 350 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 PDCD11Q14690 1871 aaKnown RBP12.16□□□□□ -0.46
VPS52-218ENST00000482399 ISM1B1AKI9 464 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 H7C0S8 307 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 PQBP1O60828 265 aaKnown RBP12.16□□□□□ -0.46
VPS52-218ENST00000482399 UGT2B17O75795 530 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 IGLV3-27P01718 113 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 IL3P08700 152 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 PTPN6P29350 595 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 MAN2A2P49641 1150 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 HNMTP50135 292 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 RNF144AP50876 292 aaPredicted RBP12.16□□□□□ -0.46
VPS52-218ENST00000482399 GNG2P59768 71 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 DSTNP60981 165 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 RPS7P62081 194 aaKnown RBP12.16□□□□□ -0.46
VPS52-218ENST00000482399 BCL2A1Q16548 175 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 ZNF385BQ569K4 471 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 CRB2Q5IJ48 1285 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 ARTNQ5T4W7 220 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 TTC23LQ6PF05 361 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 COMMD6Q7Z4G1 85 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 GALNT13Q8IUC8 556 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 FLCNQ8NFG4 579 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 CYB5D2Q8WUJ1 264 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 JPH3Q8WXH2 748 aaPredicted RBP12.16□□□□□ -0.46
VPS52-218ENST00000482399 ASB11Q8WXH4 323 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 TMEM80Q96HE8 168 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 CLCA2Q9UQC9 943 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 GSTK1Q9Y2Q3 226 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 PLXNA1Q9UIW2 1896 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 CD22P20273 847 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 LHCGRP22888 699 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 HOXD11P31277 338 aaPredicted RBP12.15□□□□□ -0.46
VPS52-218ENST00000482399 CSTF1Q05048 431 aaKnown RBP12.15□□□□□ -0.46
VPS52-218ENST00000482399 ELAVL2Q12926 359 aaKnown RBP12.15□□□□□ -0.46
VPS52-218ENST00000482399 CRHR2Q13324 411 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 VEZF1Q14119 521 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 ZXDCQ2QGD7 858 aaPredicted RBP12.15□□□□□ -0.46
VPS52-218ENST00000482399 FAHD1Q6P587 224 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 ABI3BPQ7Z7G0 1075 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 NOXA1Q86UR1 476 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 C9orf43Q8TAL5 461 aaPredicted RBP12.15□□□□□ -0.46
VPS52-218ENST00000482399 ZIC5Q96T25 663 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 PRR14Q9BWN1 585 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 BTBD2Q9BX70 525 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 ABT1Q9ULW3 272 aaKnown RBP12.15□□□□□ -0.46
VPS52-218ENST00000482399 TRAV6A0A075B6T7 132 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 LOC102723532A0A0G2JNH3 316 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 PRR23AA6NEV1 266 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 M0R3H8 397 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 GALTP07902 379 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 HOXB6P17509 224 aaKnown RBP12.15□□□□□ -0.46
VPS52-218ENST00000482399 NAT1P18440 290 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 CELP19835 753 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 CXCR2P25025 360 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 UGT2B10P36537 528 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 EPHB3P54753 998 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 WNT3P56703 355 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 DSC1Q08554 894 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 MAP4K2Q12851 820 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 GINS1Q14691 196 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 LCN1P1Q5VSP4 162 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 ALG1LQ6GMV1 187 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 AMIGO1Q86WK6 493 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 UBQLNLQ8IYU4 475 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 Q8N402 240 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 DCAF4L2Q8NA75 395 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 ANKRA2Q9H9E1 313 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 H2AFY2Q9P0M6 372 aaPredicted RBP12.15□□□□□ -0.46
VPS52-218ENST00000482399 GULP1Q9UBP9 304 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 ASF1AQ9Y294 204 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 YIPF1Q9Y548 306 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 PCDHGA2Q9Y5H1 932 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 A0A0G2JMZ2 1700 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 LRRC37A2A6NM11 1700 aa12.15□□□□□ -0.46
VPS52-218ENST00000482399 C2orf92A0A1B0GVN3 265 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 BTN3A3O00478 584 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 AKR7A2O43488 359 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 FRS3O43559 492 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 SGTAO43765 313 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 CHRNB1P11230 501 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 SRCP12931 536 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 RPS3P23396 243 aaKnown RBP eCLIP12.14□□□□□ -0.47
VPS52-218ENST00000482399 TIA1P31483 386 aaKnown RBP eCLIP12.14□□□□□ -0.47
VPS52-218ENST00000482399 IFNA8P32881 189 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 NNMTP40261 264 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 AVPR1BP47901 424 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 CTSCP53634 463 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 ZNF763Q0D2J5 394 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 IRF3Q14653 427 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 LYPD8Q6UX82 237 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 YIPF7Q8N8F6 280 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 PCSK9Q8NBP7 692 aaKnown RBP12.14□□□□□ -0.47
VPS52-218ENST00000482399 TP53I13Q8NBR0 393 aaPredicted RBP12.14□□□□□ -0.47
VPS52-218ENST00000482399 ASB15Q8WXK1 588 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 SAMD11Q96NU1 681 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 PTGFRNQ9P2B2 879 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms