RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 GPN2Q9H9Y4 310 aaPredicted RBP11.53□□□□□ -0.56
TRA2B-212ENST00000480461 ZNF282Q9UDV7 671 aaPredicted RBP11.53□□□□□ -0.56
TRA2B-212ENST00000480461 TCFL5Q9UL49 500 aa11.53□□□□□ -0.56
TRA2B-212ENST00000480461 DAPP1Q9UN19 280 aa11.53□□□□□ -0.56
TRA2B-212ENST00000480461 ATG4BQ9Y4P1 393 aa11.53□□□□□ -0.56
TRA2B-212ENST00000480461 CLDN16Q9Y5I7 305 aa11.53□□□□□ -0.56
TRA2B-212ENST00000480461 TEP1Q99973 2627 aaKnown RBP11.52□□□□□ -0.57
TRA2B-212ENST00000480461 A0A1W2PR48 441 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 C21orf140B9A014 251 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 NPIPB8E9PQR5 432 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 LSM1O15116 133 aaKnown RBP11.52□□□□□ -0.57
TRA2B-212ENST00000480461 PROM1O43490 865 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 B3GALT2O43825 422 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 PRKRAO75569 313 aaKnown RBP11.52□□□□□ -0.57
TRA2B-212ENST00000480461 PIM1P11309 404 aaPredicted RBP11.52□□□□□ -0.57
TRA2B-212ENST00000480461 SFTPCP11686 197 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 SSR2P43308 183 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 XCR1P46094 333 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 RAP1GDS1P52306 607 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 GYS2P54840 703 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 PHEXP78562 749 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 KLC1Q07866 573 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 XKR7Q5GH72 579 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 ATP1A1-AS1Q5TC04 95 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 C18orf63Q68DL7 685 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 RGS9BPQ6ZS82 235 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 MED25Q71SY5 747 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 TRIM42Q8IWZ5 723 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 MMP21Q8N119 569 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 ZCCHC7Q8N3Z6 543 aaKnown RBP11.52□□□□□ -0.57
TRA2B-212ENST00000480461 SRFBP1Q8NEF9 429 aaKnown RBP11.52□□□□□ -0.57
TRA2B-212ENST00000480461 TM4SF18Q96CE8 201 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 SLC45A3Q96JT2 553 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 PPP1R36Q96LQ0 422 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 MAGEB18Q96M61 343 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 CSF3RQ99062 836 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 NPLQ9BXD5 320 aaPredicted RBP11.52□□□□□ -0.57
TRA2B-212ENST00000480461 RBCK1Q9BYM8 510 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 WDR54Q9H977 334 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 CLK4Q9HAZ1 481 aaKnown RBP11.52□□□□□ -0.57
TRA2B-212ENST00000480461 MKKSQ9NPJ1 570 aaPredicted RBP11.52□□□□□ -0.57
TRA2B-212ENST00000480461 SIRT5Q9NXA8 310 aa11.52□□□□□ -0.57
TRA2B-212ENST00000480461 MARCOQ9UEW3 520 aaPredicted RBP11.52□□□□□ -0.57
TRA2B-212ENST00000480461 PTRH2Q9Y3E5 179 aaKnown RBP11.52□□□□□ -0.57
TRA2B-212ENST00000480461 PCSK5Q92824 1860 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 C9J4A7 227 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 TGFBR3LH3BV60 316 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 MASP2O00187 686 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 SLC28A1O00337 649 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 PGRMC2O15173 223 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 B4GALT2O60909 372 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 SKAP2O75563 359 aaPredicted RBP11.51□□□□□ -0.57
TRA2B-212ENST00000480461 CREG1O75629 220 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 CDC123O75794 336 aaPredicted RBP11.51□□□□□ -0.57
TRA2B-212ENST00000480461 FAM58BPP0C7Q3 252 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 KITP10721 976 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 PRPH2P23942 346 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 TACR1P25103 407 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 TSFMP43897 325 aaKnown RBP11.51□□□□□ -0.57
TRA2B-212ENST00000480461 RPS15P62841 145 aaKnown RBP11.51□□□□□ -0.57
TRA2B-212ENST00000480461 RHAGQ02094 409 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 TGM3Q08188 693 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 IL10RAQ13651 578 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 PDCD2Q16342 344 aaPredicted RBP11.51□□□□□ -0.57
TRA2B-212ENST00000480461 PRSS53Q2L4Q9 553 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 SPDYAQ5MJ70 313 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 VWA5B1Q5TIE3 1220 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 GALNT18Q6P9A2 607 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 DDIASQ8IXT1 998 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 OR2Y1Q8NGV0 311 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.51□□□□□ -0.57
TRA2B-212ENST00000480461 LRRC8CQ8TDW0 803 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 ADAMTS17Q8TE56 1095 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 DYDC1Q8WWB3 177 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 TBC1D20Q96BZ9 403 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 MIEF2Q96C03 454 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 C7orf26Q96N11 449 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 NUF2Q9BZD4 464 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 VN1R1Q9GZP7 353 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 SLC25A18Q9H1K4 315 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 EPN3Q9H201 632 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 LYRM4Q9HD34 91 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 PRM3Q9NNZ6 103 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 TEX10Q9NXF1 929 aaPredicted RBP11.51□□□□□ -0.57
TRA2B-212ENST00000480461 GPN3Q9UHW5 284 aaPredicted RBP11.51□□□□□ -0.57
TRA2B-212ENST00000480461 ADAM29Q9UKF5 820 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 FBXW2Q9UKT8 454 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 EXO1Q9UQ84 846 aaKnown RBP11.51□□□□□ -0.57
TRA2B-212ENST00000480461 MAN2B2Q9Y2E5 1009 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 DLGAP4Q9Y2H0 992 aa11.51□□□□□ -0.57
TRA2B-212ENST00000480461 CCDC88CQ9P219 2028 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 MYOCOSA0A1B0GUC4 107 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 ARHGAP10A1A4S6 786 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 IDSB3KWA1 339 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 TCP11X1B4DZS4 312 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 PEX11AO75192 247 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 SEC22BO75396 215 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 RSL1D1O76021 490 aaKnown RBP11.5□□□□□ -0.57
TRA2B-212ENST00000480461 SNUPNO95149 360 aaKnown RBP11.5□□□□□ -0.57
TRA2B-212ENST00000480461 FHP07954 510 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms