RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 ESAMQ96AP7 390 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 TXNDC15Q96J42 360 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 PFDN5Q99471 154 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 CTPS2Q9NRF8 586 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 RBFOX1Q9NWB1 397 aaKnown RBP5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 PCTPQ9UKL6 214 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 ZSCAN5BA6NJL1 495 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 CPSF4LA6NMK7 179 aaKnown RBP5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 ZNF208O43345 1280 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 RFPL3O75679 317 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 POP7O75817 140 aaKnown RBP5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 ATG12O94817 140 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 GSRP00390 522 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 CHMP24386 653 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 GGT2P36268 569 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 TRA2BP62995 288 aaKnown RBP5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 DNASE1L3Q13609 305 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 DECR1Q16698 335 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 ENPP7Q6UWV6 458 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 LARP4Q71RC2 724 aaKnown RBP eCLIP5.91□□□□□ -1.468e-8■□□□□ 10
PRPF4B-205ENST00000480058 OR6V1Q8N148 313 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 RASGEF1AQ8N9B8 481 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 CCDC54Q8NEL0 328 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 ASB15Q8WXK1 588 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 MAFIPQ8WZ33 124 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 SLC29A1Q99808 456 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 C19orf43Q9BQ61 176 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 ZNF436Q9C0F3 470 aaPredicted RBP5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 BRD7Q9NPI1 651 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 POLHQ9Y253 713 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 MRPS17Q9Y2R5 130 aaKnown RBP5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 ZFP37Q9Y6Q3 630 aaPredicted RBP5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 DUOX1Q9NRD9 1551 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 RAB40ALP0C0E4 278 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 ATXN8OSP0DMR3 200 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 CA5AP35218 305 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 GCGRP47871 477 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 AVPR1BP47901 424 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 ARHGAP1Q07960 439 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 SNTA1Q13424 505 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 ZNF267Q14586 743 aaPredicted RBP5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 PDGFRLQ15198 375 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 C1orf220Q5T0J3 134 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 SYT6Q5T7P8 510 aaPredicted RBP5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 HENMT1Q5T8I9 393 aaKnown RBP5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 CREB3L2Q70SY1 520 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 LYSMD3Q7Z3D4 306 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 COQ8AQ8NI60 647 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 WDR48Q8TAF3 677 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 DEDD2Q8WXF8 326 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 RAB40AQ8WXH6 277 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 SYT3Q9BQG1 590 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 NTMT1Q9BV86 223 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 SLC12A9Q9BXP2 914 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 HOXD1Q9GZZ0 328 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 ZNF700Q9H0M5 742 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 GPSM3Q9Y4H4 160 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 TEX13DA0A0J9YY54 714 aaPredicted RBP5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 WDPCPO95876 746 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 IFNA2P01563 188 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 CAPN3P20807 821 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 LMO2P25791 158 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 CCKBRP32239 447 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 PYCR1P32322 319 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 CLCNKBP51801 687 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 TAS2R50P59544 299 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 MLLT11Q13015 90 aaPredicted RBP5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 ZNF460Q14592 562 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 WDR45BQ5MNZ6 344 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 CES4AQ5XG92 561 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 RTL6Q6ICC9 239 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 ABHD13Q7L211 337 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 ARMC10Q8N2F6 343 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 OR2L3Q8NG85 312 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 SMAP2Q8WU79 429 aaPredicted RBP5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 NSMAFQ92636 917 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 COQ10AQ96MF6 247 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 RAD9AQ99638 391 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 MRPS30Q9NP92 439 aaKnown RBP5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 SLC22A7Q9Y694 548 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 TBC1D3KA0A087X1G2 549 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 IGKV6D-21A0A0A0MT36 114 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 ANKRD33BA6NCL7 494 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 TBC1D3FA6NER0 549 aaPredicted RBP5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 BOLA2-SMG1P6H3BVE0 249 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 CCL22O00626 93 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 ERI3O43414 337 aaKnown RBP5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 IFNA10P01566 189 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 PIM1P11309 404 aaPredicted RBP5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 CKMT1AP12532 417 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 ZNF26P17031 533 aaPredicted RBP5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 CD53P19397 219 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 CXCR1P25024 350 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 NRG3P56975 720 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 BEX3Q00994 111 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 MS4A2Q01362 244 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 TAP2Q03519 686 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 PMS2P3Q13401 168 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 ENPP2Q13822 863 aa5.91□□□□□ -1.46
PRPF4B-205ENST00000480058 ARHGAP19Q14CB8 494 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms