RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 ANKHQ9HCJ1 492 aa13.75□□□□□ -0.21
COL20A1-206ENST00000479501 DZANK1Q9NVP4 752 aa13.75□□□□□ -0.21
COL20A1-206ENST00000479501 GPRC5BQ9NZH0 403 aa13.75□□□□□ -0.21
COL20A1-206ENST00000479501 REM1O75628 298 aa13.75□□□□□ -0.21
COL20A1-206ENST00000479501 SOX14O95416 240 aa13.75□□□□□ -0.21
COL20A1-206ENST00000479501 IFNA7P01567 189 aa13.75□□□□□ -0.21
COL20A1-206ENST00000479501 SDC1P18827 310 aa13.75□□□□□ -0.21
COL20A1-206ENST00000479501 MATN1P21941 496 aa13.75□□□□□ -0.21
COL20A1-206ENST00000479501 AP3S2P59780 193 aa13.75□□□□□ -0.21
COL20A1-206ENST00000479501 RPS21P63220 83 aaKnown RBP13.75□□□□□ -0.21
COL20A1-206ENST00000479501 CDKL1Q00532 357 aa13.75□□□□□ -0.21
COL20A1-206ENST00000479501 GRHL2Q6ISB3 625 aa13.75□□□□□ -0.21
COL20A1-206ENST00000479501 VTCN1Q7Z7D3 282 aa13.75□□□□□ -0.21
COL20A1-206ENST00000479501 IQCHQ86VS3 1027 aa13.75□□□□□ -0.21
COL20A1-206ENST00000479501 ASCC1Q8N9N2 400 aaKnown RBP13.75□□□□□ -0.21
COL20A1-206ENST00000479501 FAM46DQ8NEK8 389 aa13.75□□□□□ -0.21
COL20A1-206ENST00000479501 OR4C6Q8NH72 309 aa13.75□□□□□ -0.21
COL20A1-206ENST00000479501 KCTD7Q96MP8 289 aa13.75□□□□□ -0.21
COL20A1-206ENST00000479501 KXD1Q9BQD3 176 aa13.75□□□□□ -0.21
COL20A1-206ENST00000479501 OR51V1Q9H2C8 321 aa13.75□□□□□ -0.21
COL20A1-206ENST00000479501 I6L893 689 aaPredicted RBP13.74□□□□□ -0.21
COL20A1-206ENST00000479501 UBFD1O14562 309 aaKnown RBP13.74□□□□□ -0.21
COL20A1-206ENST00000479501 UGDHO60701 494 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 RETP07949 1114 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 RUNX3Q13761 415 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 ABHD13Q7L211 337 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 COMMD6Q7Z4G1 85 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 MFSD6LQ8IWD5 586 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 MRPL43Q8N983 215 aaKnown RBP13.74□□□□□ -0.21
COL20A1-206ENST00000479501 P2RY13Q9BPV8 354 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 TUBA1CQ9BQE3 449 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 SPATA9Q9BWV2 254 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 ACPTQ9BZG2 426 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 CHIAQ9BZP6 476 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 PAK6Q9NQU5 681 aaPredicted RBP13.74□□□□□ -0.21
COL20A1-206ENST00000479501 TBC1D24Q9ULP9 559 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 URB1O60287 2271 aaKnown RBP13.74□□□□□ -0.21
COL20A1-206ENST00000479501 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.74□□□□□ -0.21
COL20A1-206ENST00000479501 GRIA2P42262 883 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 RPP38P78345 283 aaKnown RBP13.74□□□□□ -0.21
COL20A1-206ENST00000479501 MAB21L1Q13394 359 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 TMEM44Q2T9K0 475 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 FBXO46Q6PJ61 603 aaPredicted RBP13.74□□□□□ -0.21
COL20A1-206ENST00000479501 KCT2Q8NC54 265 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 PJA1Q8NG27 643 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 NETO1Q8TDF5 533 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 ZNF597Q96LX8 424 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 FRMD6Q96NE9 622 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 BHLHE41Q9C0J9 482 aaPredicted RBP13.74□□□□□ -0.21
COL20A1-206ENST00000479501 NEK6Q9HC98 313 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 ZNF451Q9Y4E5 1061 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 MCM3APO60318 1980 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 COL4A5P29400 1685 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 HMGN1P05114 100 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 MMP2P08253 660 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 ETFAP13804 333 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 HMGA1P17096 107 aaKnown RBP13.74□□□□□ -0.21
COL20A1-206ENST00000479501 GNG2P59768 71 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 GRIN2CQ14957 1233 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 RUNDC3AQ59EK9 446 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 ASB18Q6ZVZ8 466 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 GAREM2Q75VX8 874 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 SHKBP1Q8TBC3 707 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 MAELQ96JY0 434 aaKnown RBP13.74□□□□□ -0.21
COL20A1-206ENST00000479501 AASSQ9UDR5 926 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 MLXQ9UH92 298 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 A0A1W2PQU0 124 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 CPSF4LA6NMK7 179 aaKnown RBP13.74□□□□□ -0.21
COL20A1-206ENST00000479501 ABLIM3O94929 683 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 ALPPL2P10696 532 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 AOAHP28039 575 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 PIGFQ07326 219 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 IDNKQ5T6J7 187 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 IER5LQ5T953 404 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 SHQ1Q6PI26 577 aaKnown RBP13.74□□□□□ -0.21
COL20A1-206ENST00000479501 TMEM207Q6UWW9 146 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 LIPIQ6XZB0 460 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 CCDC116Q8IYX3 515 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 ASB11Q8WXH4 323 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 SAMD11Q96NU1 681 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 SLAMF8Q9P0V8 285 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 ACSL6Q9UKU0 697 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 SCN1AP35498 2009 aa13.74□□□□□ -0.21
COL20A1-206ENST00000479501 A8MV72 311 aaPredicted RBP13.73□□□□□ -0.21
COL20A1-206ENST00000479501 RPS3AP61247 264 aaKnown RBP13.73□□□□□ -0.21
COL20A1-206ENST00000479501 RAPSNQ13702 412 aa13.73□□□□□ -0.21
COL20A1-206ENST00000479501 UGT2A3Q6UWM9 527 aa13.73□□□□□ -0.21
COL20A1-206ENST00000479501 MNTQ99583 582 aa13.73□□□□□ -0.21
COL20A1-206ENST00000479501 IFT27Q9BW83 186 aa13.73□□□□□ -0.21
COL20A1-206ENST00000479501 AGPAT4Q9NRZ5 378 aa13.73□□□□□ -0.21
COL20A1-206ENST00000479501 HCN1O60741 890 aa13.73□□□□□ -0.21
COL20A1-206ENST00000479501 CLCN7P51798 805 aa13.73□□□□□ -0.21
COL20A1-206ENST00000479501 SMSP52788 366 aa13.73□□□□□ -0.21
COL20A1-206ENST00000479501 CTSCP53634 463 aa13.73□□□□□ -0.21
COL20A1-206ENST00000479501 CSTF1Q05048 431 aaKnown RBP13.73□□□□□ -0.21
COL20A1-206ENST00000479501 ST3GAL3Q11203 375 aa13.73□□□□□ -0.21
COL20A1-206ENST00000479501 TUBB3Q13509 450 aa13.73□□□□□ -0.21
COL20A1-206ENST00000479501 TSTQ16762 297 aaKnown RBP13.73□□□□□ -0.21
COL20A1-206ENST00000479501 TMEM236Q5W0B7 351 aa13.73□□□□□ -0.21
COL20A1-206ENST00000479501 PHC2Q8IXK0 858 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms