RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 FNDC8Q8TC99 324 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 MIPOL1Q8TD10 442 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 BTN2A2Q8WVV5 523 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 SNX19Q92543 992 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 MUL1Q969V5 352 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 TMEM159Q96B96 161 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 REPS1Q96D71 796 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 OTUB2Q96DC9 234 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 CXorf40BQ96DE9 158 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 LRIG1Q96JA1 1093 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 Q96M66 194 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 FOPNLQ96NB1 174 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 VPS35Q96QK1 796 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 PANX1Q96RD7 426 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 P2RY13Q9BPV8 354 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 APOL4Q9BPW4 351 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 DCUN1D5Q9BTE7 237 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 BBS2Q9BXC9 721 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 SLC46A2Q9BY10 475 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 AMBRA1Q9C0C7 1298 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 REXO4Q9GZR2 422 aaKnown RBP4.74□□□□□ -1.65
SF3B6-202ENST00000478050 IL1RAPQ9NPH3 570 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 AASDHPPTQ9NRN7 309 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 SLC6A13Q9NSD5 602 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 TBCCD1Q9NVR7 557 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 SPATA6Q9NWH7 488 aaPredicted RBP4.74□□□□□ -1.65
SF3B6-202ENST00000478050 THG1LQ9NWX6 298 aaKnown RBP4.74□□□□□ -1.65
SF3B6-202ENST00000478050 SCN3BQ9NY72 215 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 GPRC5BQ9NZH0 403 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 TBC1D14Q9P2M4 693 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 DKK3Q9UBP4 350 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 VPS29Q9UBQ0 182 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 SUSD2Q9UGT4 822 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 TMEFF2Q9UIK5 374 aaPredicted RBP4.74□□□□□ -1.65
SF3B6-202ENST00000478050 BTNL2Q9UIR0 455 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 MBD1Q9UIS9 605 aaPredicted RBP4.74□□□□□ -1.65
SF3B6-202ENST00000478050 UTS2RQ9UKP6 389 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 BAG5Q9UL15 447 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 PSME2Q9UL46 239 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 SLC22A14Q9Y267 594 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 TPRKBQ9Y3C4 175 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 PCDHGB1Q9Y5G3 927 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 PCDHGA8Q9Y5G5 932 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 MAGED1Q9Y5V3 778 aaPredicted RBP4.74□□□□□ -1.65
SF3B6-202ENST00000478050 TRIOO75962 3097 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 ZNF462Q96JM2 2506 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 PLXND1Q9Y4D7 1925 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 CNOT1A5YKK6 2376 aaKnown RBP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 MUC22E2RYF6 1773 aaPredicted RBP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 KMT2EQ8IZD2 1858 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 SLC5A10A0PJK1 596 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 ZNF99A8MXY4 864 aaPredicted RBP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 NEDD8-MDP1E9PL57 170 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 M0QX08 132 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 SLC9A3R1O14745 358 aaPredicted RBP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 SCAMP2O15127 329 aaKnown RBP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 CCL16O15467 120 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 TBX1O43435 398 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 SUV39H1O43463 412 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 SGTAO43765 313 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 PRAMEF4O60810 478 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 PFDN1O60925 122 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 SCN2BO60939 215 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 ATG13O75143 517 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 RFPL3O75679 317 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 LRATO95237 230 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 KCNK5O95279 499 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 CPSF4O95639 269 aaKnown RBP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 CXCL14O95715 111 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 ZNF682O95780 498 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 ANGPTL1O95841 491 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 FGBP02675 491 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 C9P02748 559 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 ABCB1P08183 1280 aaPredicted RBP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 SRPRAP08240 638 aaKnown RBP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 TYRP14679 529 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 ZNF12P17014 697 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 GJA1P17302 382 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 PTPN2P17706 415 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 ENGP17813 658 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 MATN1P21941 496 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 PTX3P26022 381 aaPredicted RBP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 TIA1P31483 386 aaKnown RBP eCLIP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 KDELR2P33947 212 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 PCGF2P35227 344 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 POLR2IP36954 125 aaKnown RBP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 PIGAP37287 484 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 STT3AP46977 705 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 PRLHRP49683 370 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 PLA2G16P53816 162 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 ITGA1P56199 1179 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 ISL1P61371 349 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 SUMO1P63165 101 aaKnown RBP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 IL5RAQ01344 420 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 MVKQ03426 396 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 SIGLEC14Q08ET2 396 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 NAE1Q13564 534 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 GTF2H3Q13889 308 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 SPIDRQ14159 915 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 DOC2AQ14183 400 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms