RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 PRAMEF25A6NGN4 478 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 MBTPS2O43462 519 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 WBP4O75554 376 aaKnown RBP11.62□□□□□ -0.55
PTPRF-212ENST00000477970 PDE9AO76083 593 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 HTR1BP28222 390 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 CSNK1G2P78368 415 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 PRDX1Q06830 199 aaKnown RBP11.62□□□□□ -0.55
PTPRF-212ENST00000477970 SMAD2Q15796 467 aaKnown RBP11.62□□□□□ -0.55
PTPRF-212ENST00000477970 NPTX1Q15818 432 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.62□□□□□ -0.55
PTPRF-212ENST00000477970 ENTHD1Q8IYW4 607 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 LMNTD1Q8N9Z9 388 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 LINC01555Q8NAE3 123 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 OR10G2Q8NGC3 310 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 SPPL2AQ8TCT8 520 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 TANKQ92844 425 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 BTBD1Q9H0C5 482 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 EXD2Q9NVH0 621 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 PCDHGA2Q9Y5H1 932 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 RGS10O43665 173 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 PRICKLE3O43900 615 aaPredicted RBP11.62□□□□□ -0.55
PTPRF-212ENST00000477970 BCL10O95999 233 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 KIR2DL1P43626 348 aaPredicted RBP11.62□□□□□ -0.55
PTPRF-212ENST00000477970 FGL2Q14314 439 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 LAPTM4AQ15012 233 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 MLF2Q15773 248 aaPredicted RBP11.62□□□□□ -0.55
PTPRF-212ENST00000477970 CTF1Q16619 201 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 ADPRMQ3LIE5 342 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 IER5LQ5T953 404 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 UBE2UQ5VVX9 321 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 HDDC3Q8N4P3 179 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 RASSF5Q8WWW0 418 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 ZBED6CLQ96FA7 236 aaPredicted RBP11.62□□□□□ -0.55
PTPRF-212ENST00000477970 DHRS1Q96LJ7 313 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 GABRG3Q99928 467 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 DCUN1D5Q9BTE7 237 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 C1QTNF7Q9BXJ2 289 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 TM7SF3Q9NS93 570 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 SIRT3Q9NTG7 399 aaPredicted RBP11.62□□□□□ -0.55
PTPRF-212ENST00000477970 CDH23Q9H251 3354 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 SH3PXD2BA1X283 911 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 C19orf67A6NJJ6 358 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 SLC22A1O15245 554 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 PCDH8O95206 1070 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 CD247P20963 164 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 TSFMP43897 325 aaKnown RBP11.62□□□□□ -0.55
PTPRF-212ENST00000477970 CLCNKAP51800 687 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 FAM92BQ6ZTR7 304 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 UBE3DQ7Z6J8 389 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 RORBQ92753 470 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 CAMK1GQ96NX5 476 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 F2RL3Q96RI0 385 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 INSM2Q96T92 566 aaPredicted RBP11.62□□□□□ -0.55
PTPRF-212ENST00000477970 ETAA1Q9NY74 926 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 ERVK-18Q9QC07 812 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 ACSL6Q9UKU0 697 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 MAP4K5Q9Y4K4 846 aa11.62□□□□□ -0.55
PTPRF-212ENST00000477970 COL4A2P08572 1712 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 XPNPEP2O43895 674 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 RECKO95980 971 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 AQP1P29972 269 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 KRT20P35900 424 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 STT3AP46977 705 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 ANGPTL8Q6UXH0 198 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 DEPDC4Q8N2C3 294 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 DENND6BQ8NEG7 585 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 FEVQ99581 238 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 SLAMF7Q9NQ25 335 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 ACER3Q9NUN7 267 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 PCDHGA12O60330 932 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 KDM1AO60341 852 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 BCAS1O75363 584 aaPredicted RBP11.61□□□□□ -0.55
PTPRF-212ENST00000477970 CLPXO76031 633 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 CEACAM5P06731 702 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 TFPTP0C1Z6 253 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 CYP4B1P13584 511 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 GABRB1P18505 474 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 FMO3P31513 532 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 AHRP35869 848 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 SPIBQ01892 262 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 OR4C11Q6IEV9 310 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 TMEM64Q6YI46 380 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 OR2A1Q8NGT9 310 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 RHOXF1Q8NHV9 184 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 SORBS1Q9BX66 1292 aaKnown RBP11.61□□□□□ -0.55
PTPRF-212ENST00000477970 TWSG1Q9GZX9 223 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 PREBQ9HCU5 417 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 PRM3Q9NNZ6 103 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 ACOT13Q9NPJ3 140 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 TMEM184CQ9NVA4 438 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 SCML1Q9UN30 329 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 RNF6Q9Y252 685 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 B3GNT3Q9Y2A9 372 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 WDR37Q9Y2I8 494 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 HEMK1Q9Y5R4 338 aaPredicted RBP11.61□□□□□ -0.55
PTPRF-212ENST00000477970 REV3LO60673 3130 aa11.61□□□□□ -0.55
PTPRF-212ENST00000477970 PLXND1Q9Y4D7 1925 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 DOCK8Q8NF50 2099 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 INMTO95050 263 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 CBLP22681 906 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms