RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 EFCAB3Q8N7B9 438 aa14.94□□□□□ -0.02
COPS3-207ENST00000477299 NUDT8Q8WV74 236 aa14.94□□□□□ -0.02
COPS3-207ENST00000477299 MAGEB18Q96M61 343 aa14.94□□□□□ -0.02
COPS3-207ENST00000477299 CENPKQ9BS16 269 aa14.94□□□□□ -0.02
COPS3-207ENST00000477299 AHSPQ9NZD4 102 aa14.94□□□□□ -0.02
COPS3-207ENST00000477299 ZZEF1O43149 2961 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 SOCS6O14544 535 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 LDB3O75112 727 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 AIFM1O95831 613 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 CHEK2O96017 543 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 HEXBP07686 556 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 PPP2R1BP30154 601 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 TIA1P31483 386 aaKnown RBP eCLIP14.93□□□□□ -0.02
COPS3-207ENST00000477299 HK2P52789 917 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 ARFIP1P53367 373 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 CXADRP78310 365 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 MC1RQ01726 317 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 ACSM2AQ08AH3 577 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 ATP1A4Q13733 1029 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 SSPNQ14714 243 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 NR6A1Q15406 480 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 ACSM2BQ68CK6 577 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 CYP20A1Q6UW02 462 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 RNF165Q6ZSG1 346 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 DOK4Q8TEW6 326 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 THOC1Q96FV9 657 aaKnown RBP14.93□□□□□ -0.02
COPS3-207ENST00000477299 EGLN2Q96KS0 407 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 PTCHD1Q96NR3 888 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 ROGDIQ9GZN7 287 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 LRTM1Q9HBL6 345 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 LYRM4Q9HD34 91 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 NMRK1Q9NWW6 199 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 C5AR2Q9P296 337 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 HEY2Q9UBP5 337 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 BAIAP2L1Q9UHR4 511 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 ADAM29Q9UKF5 820 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 HS3ST3B1Q9Y662 390 aa14.93□□□□□ -0.02
COPS3-207ENST00000477299 CFAP47Q6ZTR5 3102 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 A0A088AWK7 358 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 GOLGA8QA0A0J9YX86 632 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 GOLGA8OA6NCC3 632 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 ZNF891A8MT65 544 aaPredicted RBP14.92□□□□□ -0.02
COPS3-207ENST00000477299 TCP11X1B4DZS4 312 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 GOLGA8NF8WBI6 632 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 K7ENP7 123 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 SDHDO14521 159 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 RGS14O43566 566 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 PCDH7O60245 1069 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 RSL1D1O76021 490 aaKnown RBP14.92□□□□□ -0.02
COPS3-207ENST00000477299 ANXA4P09525 319 aaPredicted RBP14.92□□□□□ -0.02
COPS3-207ENST00000477299 ZNF10P21506 573 aaPredicted RBP14.92□□□□□ -0.02
COPS3-207ENST00000477299 PRPH2P23942 346 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 TSFMP43897 325 aaKnown RBP14.92□□□□□ -0.02
COPS3-207ENST00000477299 MAPK12P53778 367 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 SKP1P63208 163 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 EEF1A2Q05639 463 aaKnown RBP14.92□□□□□ -0.02
COPS3-207ENST00000477299 CDC20Q12834 499 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 CHAF1BQ13112 559 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 UGT8Q16880 541 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 TUBB8Q3ZCM7 444 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 C6orf136Q5SQH8 315 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 BROXQ5VW32 411 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 NIPAL1Q6NVV3 410 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 NOXRED1Q6NXP6 359 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 FAM180BQ6P0A1 224 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 INO80CQ6PI98 192 aaPredicted RBP14.92□□□□□ -0.02
COPS3-207ENST00000477299 KIRREL2Q6UWL6 708 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 PLPP5Q8NEB5 264 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 C16orf78Q8WTQ4 265 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 ANKRD9Q96BM1 317 aaPredicted RBP14.92□□□□□ -0.02
COPS3-207ENST00000477299 C19orf60Q96EN9 201 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 OR1F2PQ96R84 312 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 C1orf50Q9BV19 199 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 WDR55Q9H6Y2 383 aaPredicted RBP14.92□□□□□ -0.02
COPS3-207ENST00000477299 AKTIPQ9H8T0 292 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 CLK4Q9HAZ1 481 aaKnown RBP14.92□□□□□ -0.02
COPS3-207ENST00000477299 PRTFDC1Q9NRG1 225 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 C14orf105Q9NVL8 296 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 C1orf109Q9NX04 203 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 SIRT5Q9NXA8 310 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 MCM8Q9UJA3 840 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 EXO1Q9UQ84 846 aaKnown RBP14.92□□□□□ -0.02
COPS3-207ENST00000477299 PADI2Q9Y2J8 665 aa14.92□□□□□ -0.02
COPS3-207ENST00000477299 TNRC6AQ8NDV7 1962 aaKnown RBP14.92□□□□□ -0.02
COPS3-207ENST00000477299 NUP214P35658 2090 aaPredicted RBP14.91□□□□□ -0.02
COPS3-207ENST00000477299 LOC400499M0QZD8 3231 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 MGAQ8IWI9 3026 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 A8MUA0 341 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 NPIPB8E9PQR5 432 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 PSMD12O00232 456 aaPredicted RBP14.91□□□□□ -0.02
COPS3-207ENST00000477299 FGF17O60258 216 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 PRMT3O60678 531 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 MMP11P24347 488 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 TAS2R50P59544 299 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 RPL38P63173 70 aaKnown RBP14.91□□□□□ -0.02
COPS3-207ENST00000477299 TNFRSF17Q02223 184 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 VAC14Q08AM6 782 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 COL28A1Q2UY09 1125 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 DEFB109BQ30KR1 87 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 ZNF750Q32MQ0 723 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms