RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 FAM163BP0C2L3 166 aa17.89■□□□□ 0.45
VARS2-209ENST00000477288 GSK3BP49841 420 aa17.89■□□□□ 0.45
VARS2-209ENST00000477288 SERINC3Q13530 473 aa17.89■□□□□ 0.45
VARS2-209ENST00000477288 FBXO43Q4G163 708 aa17.89■□□□□ 0.45
VARS2-209ENST00000477288 SMG8Q8ND04 991 aaKnown RBP17.89■□□□□ 0.45
VARS2-209ENST00000477288 SPHK2Q9NRA0 654 aa17.89■□□□□ 0.45
VARS2-209ENST00000477288 PPP4R1LQ9P1A2 415 aa17.89■□□□□ 0.45
VARS2-209ENST00000477288 B4GALT7Q9UBV7 327 aa17.89■□□□□ 0.45
VARS2-209ENST00000477288 PRODH2Q9UF12 536 aa17.89■□□□□ 0.45
VARS2-209ENST00000477288 STC1P52823 247 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 MAB21L1Q13394 359 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 WDR92Q96MX6 357 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 MCHR1Q99705 422 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 FAM159BA6NKW6 160 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 DUX1O43812 170 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 CD72P21854 359 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 CYBRD1Q53TN4 286 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 TMEM234Q8WY98 164 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 SLC25A44Q96H78 314 aaPredicted RBP17.88■□□□□ 0.45
VARS2-209ENST00000477288 ATXN7L1Q9ULK2 861 aaPredicted RBP17.88■□□□□ 0.45
VARS2-209ENST00000477288 FASLGP48023 281 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 RBM39Q14498 530 aaKnown RBP17.88■□□□□ 0.45
VARS2-209ENST00000477288 LRIF1Q5T3J3 769 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 NIPAL1Q6NVV3 410 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 SFXN1Q9H9B4 322 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 DNAJB4Q9UDY4 337 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 HRGP04196 525 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 RPA4Q13156 261 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 KCNJ11Q14654 390 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 SPANXN4Q5MJ08 99 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 ASPGQ86U10 573 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 CILP2Q8IUL8 1156 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 ERI1Q8IV48 349 aaKnown RBP17.88■□□□□ 0.45
VARS2-209ENST00000477288 PHC2Q8IXK0 858 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 TIGD4Q8IY51 512 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 OR51G2Q8NGK0 314 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 ATG5Q9H1Y0 275 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 GAS6Q14393 721 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 MLC1Q15049 377 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 PAFAH1B3Q15102 231 aaKnown RBP17.88■□□□□ 0.45
VARS2-209ENST00000477288 MTFR2Q6P444 385 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 UBQLNLQ8IYU4 475 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 OR4K1Q8NGD4 311 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 LRCH3Q96II8 777 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 PEAK1Q9H792 1746 aa17.88■□□□□ 0.45
VARS2-209ENST00000477288 GSTT2P0CG29 244 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 JUNDP17535 347 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 STK19P49842 368 aaPredicted RBP17.87■□□□□ 0.45
VARS2-209ENST00000477288 NADK2Q4G0N4 442 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 TRMT10AQ8TBZ6 339 aaKnown RBP17.87■□□□□ 0.45
VARS2-209ENST00000477288 FCAMRQ8WWV6 532 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 BIRC7Q96CA5 298 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 C1orf21Q9H246 121 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 SLC7A11Q9UPY5 501 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 LCN1P31025 176 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 SLC9A3P48764 834 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 ZNF763Q0D2J5 394 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 PLCXD2Q0VAA5 305 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 NNATQ16517 81 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 ZNF542PQ5EBM4 170 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 ZNF100Q8IYN0 542 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 PCDHGB6Q9Y5F9 930 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 FZD9O00144 591 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 S1PR1P21453 382 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 OR4D2P58180 307 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 TAS2R43P59537 309 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 GALNT2Q10471 571 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 COL9A2Q14055 689 aaPredicted RBP17.87■□□□□ 0.45
VARS2-209ENST00000477288 SLC39A4Q6P5W5 647 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 C16orf58Q96GQ5 468 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 SAMD11Q96NU1 681 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 TSGA13Q96PP4 275 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 PKP2Q99959 881 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 PCDHGA2Q9Y5H1 932 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 A0A1W2PPK0 400 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 BRINP1O60477 761 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 GJB5O95377 273 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 ASGR2P07307 311 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 OGDHQ02218 1023 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 HNRNPA0Q13151 305 aaKnown RBP17.87■□□□□ 0.45
VARS2-209ENST00000477288 HMGN2P46Q86SG4 172 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 OR9I1Q8NGQ6 314 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 MAFIPQ8WZ33 124 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 SLC7A8Q9UHI5 535 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 CACNA1FO60840 1977 aa17.87■□□□□ 0.45
VARS2-209ENST00000477288 F8A1P23610 371 aa17.86■□□□□ 0.45
VARS2-209ENST00000477288 RBMS1P29558 406 aaKnown RBP17.86■□□□□ 0.45
VARS2-209ENST00000477288 RPL26P61254 145 aaKnown RBP17.86■□□□□ 0.45
VARS2-209ENST00000477288 ASTE1Q2TB18 679 aaPredicted RBP17.86■□□□□ 0.45
VARS2-209ENST00000477288 PLEKHS1Q5SXH7 462 aa17.86■□□□□ 0.45
VARS2-209ENST00000477288 RAET1LQ5VY80 246 aa17.86■□□□□ 0.45
VARS2-209ENST00000477288 COMTD1Q86VU5 262 aa17.86■□□□□ 0.45
VARS2-209ENST00000477288 BADQ92934 168 aa17.86■□□□□ 0.45
VARS2-209ENST00000477288 G6PC3Q9BUM1 346 aa17.86■□□□□ 0.45
VARS2-209ENST00000477288 OSBPL7Q9BZF2 842 aa17.86■□□□□ 0.45
VARS2-209ENST00000477288 H3BUI4 141 aa17.86■□□□□ 0.45
VARS2-209ENST00000477288 KCNC3Q14003 757 aa17.86■□□□□ 0.45
VARS2-209ENST00000477288 TRAM2Q15035 370 aa17.86■□□□□ 0.45
VARS2-209ENST00000477288 ZNF550Q7Z398 422 aa17.86■□□□□ 0.45
VARS2-209ENST00000477288 UBE2Q1Q7Z7E8 422 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms