RNA–Protein interactions for RNA: ENST00000475445.1

GGA1-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 2,614 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-218	ENST00000475445	LZTS3	O60299	673 aa	Predicted RBP	13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	POP7	O75817	140 aa	Known RBP	13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	TGFB1	P01137	390 aa		13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	IFNA14	P01570	189 aa		13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	FGB	P02675	491 aa		13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	ITGA2	P17301	1181 aa		13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	KRT20	P35900	424 aa		13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	MASP1	P48740	699 aa		13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	ST13	P50502	369 aa	Known RBP	13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	OCA2	Q04671	838 aa		13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	SCARB2	Q14108	478 aa		13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	ZNF846	Q147U1	533 aa		13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	CLCA4	Q14CN2	919 aa		13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	ZNF630	Q2M218	657 aa	Predicted RBP	13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	TMEM52B	Q4KMG9	183 aa		13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	FNDC3B	Q53EP0	1204 aa	Known RBP	13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	COX20	Q5RI15	118 aa		13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	C9orf64	Q5T6V5	341 aa		13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	LCTL	Q6UWM7	567 aa		13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	TSEN54	Q7Z6J9	526 aa	Known RBP	13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	CCDC71	Q8IV32	467 aa	Predicted RBP	13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	SLC30A8	Q8IWU4	369 aa		13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	ETFBKMT	Q8IXQ9	262 aa		13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	WDR48	Q8TAF3	677 aa		13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	LRRC3B	Q96PB8	259 aa		13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	SIGLEC11	Q96RL6	698 aa		13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	RAD9A	Q99638	391 aa		13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	OR51B5	Q9H339	312 aa		13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	SCPEP1	Q9HB40	452 aa		13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	TAS2R9	Q9NYW1	312 aa		13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	MRPS23	Q9Y3D9	190 aa	Known RBP	13.73	□□□□□ -0.21
GGA1-218	ENST00000475445	WBP4	O75554	376 aa	Known RBP	13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	ANXA8	P13928	327 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	ADRB3	P13945	408 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	EPHA2	P29317	976 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	CBX5	P45973	191 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	MAP2K4	P45985	399 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	METAP1	P53582	386 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	FPGS	Q05932	587 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	ELAVL3	Q14576	367 aa	Known RBP	13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	PRAMEF14	Q5SWL7	426 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	PRAMEF13	Q5VWM6	474 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	ZNF852	Q6ZMS4	543 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	P2RY8	Q86VZ1	359 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	ZNF547	Q8IVP9	402 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	C7orf61	Q8IZ16	206 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	MAP6	Q96JE9	813 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	MYOC	Q99972	504 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	ACOT13	Q9NPJ3	140 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	C1GALT1	Q9NS00	363 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	PRIM2	P49643	509 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	MLLT10	P55197	1068 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	TAS2R50	P59544	299 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	EEF1A2	Q05639	463 aa	Known RBP	13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	PPIG	Q13427	754 aa	Known RBP eCLIP	13.72	□□□□□ -0.21	3e-8	■■■■□ 19.9
GGA1-218	ENST00000475445	EIF4H	Q15056	248 aa	Known RBP	13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	LRIT3	Q3SXY7	679 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	KCTD20	Q7Z5Y7	419 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	ENTHD1	Q8IYW4	607 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	KRT78	Q8N1N4	520 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	LILRB2	Q8N423	598 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	OR4C15	Q8NGM1	316 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	FCGR1B	Q92637	280 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	PMEPA1	Q969W9	287 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	NXPE3	Q969Y0	559 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	RAD51AP1	Q96B01	352 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	ZNF300	Q96RE9	604 aa	Predicted RBP	13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	ZNF717	Q9BY31	904 aa	Predicted RBP	13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	ZDHHC5	Q9C0B5	715 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	PLCXD1	Q9NUJ7	323 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	SPAST	Q9UBP0	616 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	POFUT2	Q9Y2G5	429 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	PCDHGA6	Q9Y5G7	932 aa		13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.72	□□□□□ -0.21
GGA1-218	ENST00000475445	ASNA1	O43681	348 aa		13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	PCDHGA12	O60330	932 aa		13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	PEX14	O75381	377 aa		13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	KLHL18	O94889	574 aa		13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	HLA-E	P13747	358 aa		13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	KEL	P23276	732 aa		13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	GGT2	P36268	569 aa		13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	MC1R	Q01726	317 aa		13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	TEK	Q02763	1124 aa		13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	RPA4	Q13156	261 aa		13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	GNA13	Q14344	377 aa		13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	SMN1	Q16637	294 aa	Known RBP	13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	MPEG1	Q2M385	716 aa		13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	INAVA	Q3KP66	663 aa		13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	CRB2	Q5IJ48	1285 aa		13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	UBE2U	Q5VVX9	321 aa		13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	MLIP	Q5VWP3	458 aa		13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	DTX3	Q8N9I9	347 aa		13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	OR10G2	Q8NGC3	310 aa		13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	NFKBID	Q8NI38	313 aa		13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	APH1B	Q8WW43	257 aa		13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	HERVK_113	Q902F9	699 aa		13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	CIDEC	Q96AQ7	238 aa	Predicted RBP	13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	SPNS1	Q9H2V7	528 aa		13.71	□□□□□ -0.21
GGA1-218	ENST00000475445	AHSP	Q9NZD4	102 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms