RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 SOAT1P35610 550 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 GRK3P35626 688 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 CHI3L1P36222 383 aaPredicted RBP9.32□□□□□ -0.92
USP39-214ENST00000474572 SSR2P43308 183 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 LIMS1P48059 325 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 CLK3P49761 638 aaKnown RBP9.32□□□□□ -0.92
USP39-214ENST00000474572 TPMTP51580 245 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 CLDN2P57739 230 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 CXCR4P61073 352 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 CEBPEQ15744 281 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 MAPK11Q15759 364 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 BROXQ5VW32 411 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 ENPP7Q6UWV6 458 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 TMEM64Q6YI46 380 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 GPR141Q7Z602 305 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 AMIGO1Q86WK6 493 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 PLD3Q8IV08 490 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 SLC44A3Q8N4M1 653 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 TBC1D19Q8N5T2 526 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 TMEM145Q8NBT3 493 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 SETD9Q8NE22 299 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 OR2L5Q8NG80 312 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 OR5AK3PQ8NH89 298 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 ZNF420Q8TAQ5 688 aaPredicted RBP9.32□□□□□ -0.92
USP39-214ENST00000474572 NT5CQ8TCD5 201 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 ZFPM2Q8WW38 1151 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 ZBED6CLQ96FA7 236 aaPredicted RBP9.32□□□□□ -0.92
USP39-214ENST00000474572 ZNF300Q96RE9 604 aaPredicted RBP9.32□□□□□ -0.92
USP39-214ENST00000474572 MYOCQ99972 504 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 DPH7Q9BTV6 452 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 TMEM121BQ9BXQ6 578 aaPredicted RBP9.32□□□□□ -0.92
USP39-214ENST00000474572 ING2Q9H160 280 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 ABCG4Q9H172 646 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 ZNF576Q9H609 170 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 SYNPO2LQ9H987 977 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 LTB4R2Q9NPC1 389 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 GPR27Q9NS67 375 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 TRNAU1APQ9NX07 287 aaKnown RBP9.32□□□□□ -0.92
USP39-214ENST00000474572 NDUFAF4Q9P032 175 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 ZNF624Q9P2J8 865 aaPredicted RBP9.32□□□□□ -0.92
USP39-214ENST00000474572 ANKMY1Q9P2S6 941 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 CD207Q9UJ71 328 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 MOSPD1Q9UJG1 213 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 PNMA8BQ9ULN7 279 aaPredicted RBP9.32□□□□□ -0.92
USP39-214ENST00000474572 NDRG4Q9ULP0 352 aaKnown RBP9.32□□□□□ -0.92
USP39-214ENST00000474572 SAMHD1Q9Y3Z3 626 aaKnown RBP9.32□□□□□ -0.92
USP39-214ENST00000474572 ZNF451Q9Y4E5 1061 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 ASB4Q9Y574 426 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 PCDHGB3Q9Y5G1 929 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 PCDHGA2Q9Y5H1 932 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 ORC6Q9Y5N6 252 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 LYVE1Q9Y5Y7 322 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 HS3ST3A1Q9Y663 406 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 U3KQV3 271 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 OR2A25A4D2G3 310 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 ARRDC5A6NEK1 342 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 ENO4A6NNW6 628 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 MYO1GB0I1T2 1018 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 MAN2B1O00754 1011 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 PPM1DO15297 605 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 TNFSF14O43557 240 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 MITFO75030 526 aaPredicted RBP9.31□□□□□ -0.92
USP39-214ENST00000474572 NDUFS2O75306 463 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 DIRAS1O95057 198 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 OPN1SWP03999 348 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 F3P13726 295 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 IL7RP16871 459 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 JUNDP17535 347 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 CD247P20963 164 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 HIST1H1TP22492 207 aaPredicted RBP9.31□□□□□ -0.92
USP39-214ENST00000474572 DCKP27707 260 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 AQP1P29972 269 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 RRM2P31350 389 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 POLR2IP36954 125 aaKnown RBP9.31□□□□□ -0.92
USP39-214ENST00000474572 SLC19A1P41440 591 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 XCR1P46094 333 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 YAP1P46937 504 aaKnown RBP9.31□□□□□ -0.92
USP39-214ENST00000474572 PRIM2P49643 509 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 HMGA2P52926 109 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 MANFP55145 182 aaKnown RBP9.31□□□□□ -0.92
USP39-214ENST00000474572 ESRRGP62508 458 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 CDK5R2Q13319 367 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 RAPSNQ13702 412 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 LRRC32Q14392 662 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 KRT33BQ14525 404 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 RAB39AQ14964 217 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 MEP1AQ16819 746 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 ALG11Q2TAA5 492 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 KIAA1614Q5VZ46 1190 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 REEP3Q6NUK4 255 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 KIAA1324Q6UXG2 1013 aaKnown RBP9.31□□□□□ -0.92
USP39-214ENST00000474572 ANGPTL8Q6UXH0 198 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 KCTD8Q6ZWB6 473 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 C6orf120Q7Z4R8 191 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 ADCK2Q7Z695 626 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 ABI3BPQ7Z7G0 1075 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 NRROSQ86YC3 692 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 HORMAD2Q8N7B1 307 aa9.31□□□□□ -0.92
USP39-214ENST00000474572 SRFBP1Q8NEF9 429 aaKnown RBP9.31□□□□□ -0.92
USP39-214ENST00000474572 RPLP0P6Q8NHW5 317 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms