RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 PPP3R1P63098 170 aa17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 IKZF1Q13422 519 aa17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 POU4F3Q15319 338 aa17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 C10orf120Q5SQS8 335 aa17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 PRAMEF9Q5VWM5 478 aa17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 FAM122CQ6P4D5 195 aa17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 USP30Q70CQ3 517 aa17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 ZNF431Q8TF32 576 aaPredicted RBP17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 PMEPA1Q969W9 287 aa17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 AFF4Q9UHB7 1163 aaKnown RBP17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 DSPPQ9NZW4 1301 aa17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 ISM1B1AKI9 464 aa17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 GAPDHSO14556 408 aaPredicted RBP17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 HPGDSO60760 199 aa17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 SOX14O95416 240 aa17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 TRBC1P01850 177 aa17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 IGFBP1P08833 259 aaPredicted RBP17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 PPIBP23284 216 aaKnown RBP17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 IL18Q14116 193 aa17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 PHF21AQ96BD5 680 aa17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 TSSK6Q9BXA6 273 aa17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 GPR63Q9BZJ6 419 aa17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 UCKL1Q9NWZ5 548 aa17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 CCDC88CQ9P219 2028 aa17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 MGAT4AQ9UM21 535 aa17.79■□□□□ 0.44
ECHDC1-214ENST00000474289 CHP2O43745 196 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 IGLV3-27P01718 113 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 CPEP16870 476 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 ATF6P18850 670 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 DDCP20711 480 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 GRK4P32298 578 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 AGFG1P52594 562 aaKnown RBP17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 CYP4F8P98187 520 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 SF3A2Q15428 464 aaKnown RBP17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 TMEM201Q5SNT2 666 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 ZNF770Q6IQ21 691 aaPredicted RBP17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 COMMD7Q86VX2 200 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 KIF18BQ86Y91 864 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 MED18Q9BUE0 208 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 KCNN2Q9H2S1 579 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 PIGUQ9H490 435 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 FBXO44Q9H4M3 255 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 HEXA-AS1Q9H8Q6 139 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 RPL36Q9Y3U8 105 aaKnown RBP17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 RWDD3Q9Y3V2 267 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 PRAMEF33A0A0G2JMD5 474 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 QSOX1O00391 747 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 SCAMP2O15127 329 aaKnown RBP17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 PRAMEF10O60809 474 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 RAF1P04049 648 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 LHCGRP22888 699 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 MVDP53602 400 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 TWF1Q12792 350 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 FCN2Q15485 313 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 KLHL22Q53GT1 634 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 ZNF852Q6ZMS4 543 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 PLEKHM3Q6ZWE6 761 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 NPAS3Q8IXF0 933 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 GHDCQ8N2G8 530 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 ZNF366Q8N895 744 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 L3MBTL4Q8NA19 623 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 PCNPQ8WW12 178 aaKnown RBP17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 ASB8Q9H765 288 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 LIN7BQ9HAP6 207 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 ZFP64Q9NPA5 681 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 ZNF224Q9NZL3 707 aa17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 SPIN1Q9Y657 262 aaPredicted RBP17.78■□□□□ 0.44
ECHDC1-214ENST00000474289 GABRR3A8MPY1 467 aa17.77■□□□□ 0.44
ECHDC1-214ENST00000474289 F5H5T6 163 aa17.77■□□□□ 0.44
ECHDC1-214ENST00000474289 IL32P24001 234 aa17.77■□□□□ 0.44
ECHDC1-214ENST00000474289 HMGCLP35914 325 aa17.77■□□□□ 0.44
ECHDC1-214ENST00000474289 RPS25P62851 125 aaKnown RBP17.77■□□□□ 0.44
ECHDC1-214ENST00000474289 RBBP4Q09028 425 aa17.77■□□□□ 0.44
ECHDC1-214ENST00000474289 ATAT1Q5SQI0 421 aa17.77■□□□□ 0.44
ECHDC1-214ENST00000474289 LRRC70Q7Z2Q7 622 aa17.77■□□□□ 0.44
ECHDC1-214ENST00000474289 ADGRG2Q8IZP9 1017 aa17.77■□□□□ 0.44
ECHDC1-214ENST00000474289 NFKBIDQ8NI38 313 aa17.77■□□□□ 0.44
ECHDC1-214ENST00000474289 GEMIN6Q8WXD5 167 aaKnown RBP17.77■□□□□ 0.44
ECHDC1-214ENST00000474289 CREB3L1Q96BA8 519 aa17.77■□□□□ 0.44
ECHDC1-214ENST00000474289 SLC28A3Q9HAS3 691 aa17.77■□□□□ 0.44
ECHDC1-214ENST00000474289 BTNL2Q9UIR0 455 aa17.77■□□□□ 0.44
ECHDC1-214ENST00000474289 TRPM7Q96QT4 1865 aa17.77■□□□□ 0.44
ECHDC1-214ENST00000474289 ATP6V1G2-DDX39BF2Z307 99 aa17.77■□□□□ 0.43
ECHDC1-214ENST00000474289 KDELR3O43731 214 aa17.77■□□□□ 0.43
ECHDC1-214ENST00000474289 PSIP1O75475 530 aaKnown RBP17.77■□□□□ 0.43
ECHDC1-214ENST00000474289 ALPIP09923 528 aa17.77■□□□□ 0.43
ECHDC1-214ENST00000474289 SLC6A4P31645 630 aa17.77■□□□□ 0.43
ECHDC1-214ENST00000474289 MRPS6P82932 125 aaKnown RBP17.77■□□□□ 0.43
ECHDC1-214ENST00000474289 SCARB2Q14108 478 aa17.77■□□□□ 0.43
ECHDC1-214ENST00000474289 AANATQ16613 207 aa17.77■□□□□ 0.43
ECHDC1-214ENST00000474289 CPTPQ5TA50 214 aa17.77■□□□□ 0.43
ECHDC1-214ENST00000474289 RNLSQ5VYX0 342 aa17.77■□□□□ 0.43
ECHDC1-214ENST00000474289 SPRYD7Q5W111 196 aa17.77■□□□□ 0.43
ECHDC1-214ENST00000474289 NLGN2Q8NFZ4 835 aa17.77■□□□□ 0.43
ECHDC1-214ENST00000474289 TMEM163Q8TC26 289 aa17.77■□□□□ 0.43
ECHDC1-214ENST00000474289 C1GALT1C1Q96EU7 318 aa17.77■□□□□ 0.43
ECHDC1-214ENST00000474289 ING4Q9UNL4 249 aa17.77■□□□□ 0.43
ECHDC1-214ENST00000474289 PCDHB9Q9Y5E1 797 aa17.77■□□□□ 0.43
ECHDC1-214ENST00000474289 A0A0A6YYJ9 748 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 RPS10-NUDT3A0A1W2PQS6 291 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms