RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 GUCY1B2O75343 617 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 LYPLA1O75608 230 aaPredicted RBP11.67□□□□□ -0.54
DDX56-209ENST00000473924 DNAJB5O75953 348 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 HPP00738 406 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 FGF4P08620 206 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 FAM87AP0C7U9 286 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 SLC1A6P48664 564 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 HNRNPFP52597 415 aaKnown RBP11.67□□□□□ -0.54
DDX56-209ENST00000473924 EFNA3P52797 238 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 MAPK12P53778 367 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 WDR4P57081 412 aaKnown RBP11.67□□□□□ -0.54
DDX56-209ENST00000473924 OR4D2P58180 307 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 ABCE1P61221 599 aaKnown RBP11.67□□□□□ -0.54
DDX56-209ENST00000473924 ACSM2AQ08AH3 577 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 TBL3Q12788 808 aaKnown RBP11.67□□□□□ -0.54
DDX56-209ENST00000473924 AIMP2Q13155 320 aaKnown RBP11.67□□□□□ -0.54
DDX56-209ENST00000473924 STX3Q13277 289 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 LINC00303Q3SY05 128 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 SPIN4Q56A73 249 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 IRAK1BP1Q5VVH5 260 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 KANK2Q63ZY3 851 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 ACSM2BQ68CK6 577 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 NDUFAF7Q7L592 441 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 CPEB2Q7Z5Q1 589 aaKnown RBP11.67□□□□□ -0.54
DDX56-209ENST00000473924 CLNKQ7Z7G1 428 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 TRIM42Q8IWZ5 723 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 DDIASQ8IXT1 998 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 C1orf52Q8N6N3 182 aaKnown RBP11.67□□□□□ -0.54
DDX56-209ENST00000473924 TMEM52Q8NDY8 209 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 OR6Y1Q8NGX8 325 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 CHTF18Q8WVB6 975 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 TSLPQ969D9 159 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 UBL7Q96S82 380 aaPredicted RBP11.67□□□□□ -0.54
DDX56-209ENST00000473924 MESP1Q9BRJ9 268 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 RPF2Q9H7B2 306 aaKnown RBP11.67□□□□□ -0.54
DDX56-209ENST00000473924 ZNF160Q9HCG1 818 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 RIC8BQ9NVN3 520 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 KMT2BQ9UMN6 2715 aaPredicted RBP11.67□□□□□ -0.54
DDX56-209ENST00000473924 SCN2AQ99250 2005 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 ITPR1Q14643 2758 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 LOC102723996A0A087X1L8 192 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 IGHV1-45A0A0A0MS14 117 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 IGHV3-20A0A0C4DH32 117 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 GNG14A0A1W2PPG7 69 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 A6NL46 340 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 TMEM233B4DJY2 109 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 MASP2O00187 686 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 SLC28A1O00337 649 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 ITM2AO43736 263 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 CTNSO60931 367 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 SNUPNO95149 360 aaKnown RBP11.66□□□□□ -0.54
DDX56-209ENST00000473924 LINC00032P0C843 101 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 COX6A1P12074 109 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 ITGA3P26006 1051 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 TPP2P29144 1249 aaPredicted RBP11.66□□□□□ -0.54
DDX56-209ENST00000473924 ARRB2P32121 409 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 HNRNPH2P55795 449 aaKnown RBP11.66□□□□□ -0.54
DDX56-209ENST00000473924 TNFRSF17Q02223 184 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 STX4Q12846 297 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 KCNAB2Q13303 367 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 SFT2D3Q587I9 215 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 ATG16L1Q676U5 607 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 C18orf63Q68DL7 685 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 MRM1Q6IN84 353 aaKnown RBP11.66□□□□□ -0.54
DDX56-209ENST00000473924 TRIM46Q7Z4K8 759 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 PARP9Q8IXQ6 854 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 TWIST2Q8WVJ9 160 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 APIPQ96GX9 242 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 LPAR4Q99677 370 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 TUBB6Q9BUF5 446 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 TRIM55Q9BYV6 548 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 ILKAPQ9H0C8 392 aaPredicted RBP11.66□□□□□ -0.54
DDX56-209ENST00000473924 ZNF700Q9H0M5 742 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 PFDN4Q9NQP4 134 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 NECTIN3Q9NQS3 549 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 ZNF446Q9NWS9 450 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 ZDHHC2Q9UIJ5 367 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 ATG4BQ9Y4P1 393 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 ASB4Q9Y574 426 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 DNAJC15Q9Y5T4 150 aa11.66□□□□□ -0.54
DDX56-209ENST00000473924 A0A1W2PR48 441 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 TCRBV16S1A1N1A0A5B0 115 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 SYNDIG1LA6NDD5 238 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 PROM1O43490 865 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 PCDH7O60245 1069 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 LDB3O75112 727 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 SEC22BO75396 215 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 RSL1D1O76021 490 aaKnown RBP11.65□□□□□ -0.54
DDX56-209ENST00000473924 MYO1DO94832 1006 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 SEC24DO94855 1032 aaPredicted RBP11.65□□□□□ -0.54
DDX56-209ENST00000473924 IFNA16P05015 189 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 NR2F6P10588 404 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 ICAM2P13598 275 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 PPP2R1BP30154 601 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 BST1Q10588 318 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 PCOLCEQ15113 449 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 NR6A1Q15406 480 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 CES4AQ5XG92 561 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 PAPD4Q6PIY7 484 aaKnown RBP11.65□□□□□ -0.54
DDX56-209ENST00000473924 SCUBE1Q8IWY4 988 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms