RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 A0A087WUV0 522 aaPredicted RBP5.89□□□□□ -1.47
SMC5-202ENST00000471372 IGHV4-61A0A0C4DH41 118 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 ANKRD30BLA7E2S9 258 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 LGALS8O00214 317 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 B4GAT1O43505 415 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 IDH1O75874 414 aaKnown RBP5.89□□□□□ -1.47
SMC5-202ENST00000471372 SNX4O95219 450 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 IGHV4-59P01825 116 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 TPM2P07951 284 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 RRASP10301 218 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 PBLDP30039 288 aaPredicted RBP5.89□□□□□ -1.47
SMC5-202ENST00000471372 ADRA1AP35348 466 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 SLC6A8P48029 635 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 METAP1P53582 386 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 INHBEP58166 350 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 DCDC1P59894 354 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 LRRC74AQ0VAA2 488 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 OR1C1Q15619 314 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 ZNF528Q3MIS6 628 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 MPPE1Q53F39 396 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 FGD3Q5JSP0 725 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 PLPP4Q5VZY2 271 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 C9orf57Q5W0N0 161 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 C9orf47Q6ZRZ4 202 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 FAM89BQ8N5H3 189 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 FADS6Q8N9I5 356 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 CHPT1Q8WUD6 406 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 IGSF21Q96ID5 467 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 THOC3Q96J01 351 aaKnown RBP5.89□□□□□ -1.47
SMC5-202ENST00000471372 ZNF354BQ96LW1 612 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 TTC25Q96NG3 672 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 PCDHB18PQ96TA0 734 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 FICDQ9BVA6 458 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 SLC29A3Q9BZD2 475 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 ELF5Q9UKW6 265 aaPredicted RBP5.89□□□□□ -1.47
SMC5-202ENST00000471372 GRID1Q9ULK0 1009 aa5.89□□□□□ -1.47
SMC5-202ENST00000471372 A0A087WZ39 114 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 GLTPD2A6NH11 291 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 SPAG6O75602 509 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 KRT33AO76009 404 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 CA3P07451 260 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 NGFRP08138 427 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 HMBSP08397 361 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 HIST1H2AGP0C0S8 130 aaPredicted RBP5.88□□□□□ -1.47
SMC5-202ENST00000471372 CYP11B1P15538 503 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 DRD5P21918 477 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 ITGA3P26006 1051 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 PPP2R1AP30153 589 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 DCTP40126 519 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 NUMBP49757 651 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 LINC00205P59089 165 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 CDR2Q01850 454 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 MFGE8Q08431 387 aaPredicted RBP5.88□□□□□ -1.47
SMC5-202ENST00000471372 TMEM132DQ14C87 1099 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 WDR38Q5JTN6 314 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 RTL6Q6ICC9 239 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 CDC42EP5Q6NZY7 148 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 LEKR1Q6ZMV7 388 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 RFPL4BQ6ZWI9 263 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 SLC22A16Q86VW1 577 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.88□□□□□ -1.47
SMC5-202ENST00000471372 SPATA2LQ8IUW3 424 aaPredicted RBP5.88□□□□□ -1.47
SMC5-202ENST00000471372 SAMD14Q8IZD0 417 aaPredicted RBP5.88□□□□□ -1.47
SMC5-202ENST00000471372 CENPLQ8N0S6 344 aaPredicted RBP5.88□□□□□ -1.47
SMC5-202ENST00000471372 CIARTQ8N365 385 aaPredicted RBP5.88□□□□□ -1.47
SMC5-202ENST00000471372 FAM133AQ8N9E0 248 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 OR10T2Q8NGX3 314 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 HPSE2Q8WWQ2 592 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 FCAMRQ8WWV6 532 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 HIST1H2ACQ93077 130 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 NCLNQ969V3 563 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 SENP5Q96HI0 755 aaPredicted RBP5.88□□□□□ -1.47
SMC5-202ENST00000471372 C10orf90Q96M02 699 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 DEFB118Q96PH6 123 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 WWP1Q9H0M0 922 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 DDX31Q9H8H2 851 aaKnown RBP5.88□□□□□ -1.47
SMC5-202ENST00000471372 VIPAS39Q9H9C1 493 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 ATAD3AQ9NVI7 634 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 EPHA6Q9UF33 1036 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.88□□□□□ -1.47
SMC5-202ENST00000471372 UMODL1Q5DID0 1318 aa5.88□□□□□ -1.47
SMC5-202ENST00000471372 PLSCR5A0PG75 271 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 ZSCAN5CA6NGD5 496 aaPredicted RBP5.87□□□□□ -1.47
SMC5-202ENST00000471372 YJEFN3A6XGL0 299 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 PDXKO00764 312 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 MAPK13O15264 365 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 LRCH4O75427 683 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 EML2O95834 649 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 GLRA1P23415 457 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 FCGR2BP31994 310 aaPredicted RBP5.87□□□□□ -1.47
SMC5-202ENST00000471372 ACADSBP45954 432 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 NANOS3P60323 173 aaKnown RBP5.87□□□□□ -1.47
SMC5-202ENST00000471372 HSPA14Q0VDF9 509 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 MEF2DQ14814 521 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 ZNF74Q16587 644 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 CCDC142Q17RM4 750 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 ATAD3BQ5T9A4 648 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 PRSS57Q6UWY2 283 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 FOXL2NBQ6ZUU3 175 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms