RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 MRPL1Q9BYD6 325 aaKnown RBP12.79□□□□□ -0.36
SSBP1-206ENST00000467681 SHCBP1LQ9BZQ2 653 aa12.79□□□□□ -0.36
SSBP1-206ENST00000467681 VIPAS39Q9H9C1 493 aa12.79□□□□□ -0.36
SSBP1-206ENST00000467681 EML4Q9HC35 981 aaKnown RBP12.79□□□□□ -0.36
SSBP1-206ENST00000467681 ZNF160Q9HCG1 818 aa12.79□□□□□ -0.36
SSBP1-206ENST00000467681 NECTIN3Q9NQS3 549 aa12.79□□□□□ -0.36
SSBP1-206ENST00000467681 FBXW2Q9UKT8 454 aa12.79□□□□□ -0.36
SSBP1-206ENST00000467681 MRPS33Q9Y291 106 aaKnown RBP12.79□□□□□ -0.36
SSBP1-206ENST00000467681 ATG4BQ9Y4P1 393 aa12.79□□□□□ -0.36
SSBP1-206ENST00000467681 CLDN16Q9Y5I7 305 aa12.79□□□□□ -0.36
SSBP1-206ENST00000467681 SPACA6W5XKT8 324 aa12.79□□□□□ -0.36
SSBP1-206ENST00000467681 PCSK5Q92824 1860 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 IGHV3-20A0A0C4DH32 117 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 A0A1W2PR48 441 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 TCRBV16S1A1N1A0A5B0 115 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 AZIN1O14977 448 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 KLHL41O60662 606 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 CRCPO75575 148 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 SERPINA7P05543 415 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 FAM58BPP0C7Q3 252 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 UROSP10746 265 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 MAOAP21397 527 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 CPN2P22792 545 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 TLX1P31314 330 aaPredicted RBP12.78□□□□□ -0.36
SSBP1-206ENST00000467681 HNRNPH2P55795 449 aaKnown RBP12.78□□□□□ -0.36
SSBP1-206ENST00000467681 OR4D2P58180 307 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 CSTF3Q12996 717 aaKnown RBP12.78□□□□□ -0.36
SSBP1-206ENST00000467681 MYBPC3Q14896 1274 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 CYP20A1Q6UW02 462 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 SCIMPQ6UWF3 145 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 PAGE2Q7Z2X7 111 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 TRIM46Q7Z4K8 759 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 CUZD1Q86UP6 607 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 NUDT13Q86X67 352 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 KBTBD2Q8IY47 623 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 CLYBLQ8N0X4 340 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 FAM47BQ8NA70 645 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 C9orf43Q8TAL5 461 aaPredicted RBP12.78□□□□□ -0.36
SSBP1-206ENST00000467681 ARL8AQ96BM9 186 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 CSF3RQ99062 836 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 HBEGFQ99075 208 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 ACPTQ9BZG2 426 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 SEMA4CQ9C0C4 833 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 SLC25A18Q9H1K4 315 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 RIC8BQ9NVN3 520 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 LYARQ9NX58 379 aaKnown RBP12.78□□□□□ -0.36
SSBP1-206ENST00000467681 PHF11Q9UIL8 331 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 TRAF6Q9Y4K3 522 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 LOC400499M0QZD8 3231 aa12.78□□□□□ -0.36
SSBP1-206ENST00000467681 TMEM120BA0PK00 339 aa12.77□□□□□ -0.37
SSBP1-206ENST00000467681 WDR91A4D1P6 747 aa12.77□□□□□ -0.37
SSBP1-206ENST00000467681 K7EM74 188 aa12.77□□□□□ -0.37
SSBP1-206ENST00000467681 GBAP04062 536 aa12.77□□□□□ -0.37
SSBP1-206ENST00000467681 CHRNGP07510 517 aa12.77□□□□□ -0.37
SSBP1-206ENST00000467681 ITGA3P26006 1051 aa12.77□□□□□ -0.37
SSBP1-206ENST00000467681 TPP2P29144 1249 aaPredicted RBP12.77□□□□□ -0.37
SSBP1-206ENST00000467681 ARRB2P32121 409 aa12.77□□□□□ -0.37
SSBP1-206ENST00000467681 SLC13A2Q13183 592 aa12.77□□□□□ -0.37
SSBP1-206ENST00000467681 CCNYL2Q5T2Q4 361 aa12.77□□□□□ -0.37
SSBP1-206ENST00000467681 C18orf63Q68DL7 685 aa12.77□□□□□ -0.37
SSBP1-206ENST00000467681 RIPOR1Q6ZS17 1223 aa12.77□□□□□ -0.37
SSBP1-206ENST00000467681 ZCCHC23Q6ZST2 131 aa12.77□□□□□ -0.37
SSBP1-206ENST00000467681 COMMD6Q7Z4G1 85 aa12.77□□□□□ -0.37
SSBP1-206ENST00000467681 C7orf57Q8NEG2 295 aa12.77□□□□□ -0.37
SSBP1-206ENST00000467681 TANKQ92844 425 aa12.77□□□□□ -0.37
SSBP1-206ENST00000467681 ANKRD9Q96BM1 317 aaPredicted RBP12.77□□□□□ -0.37
SSBP1-206ENST00000467681 THOC3Q96J01 351 aaKnown RBP12.77□□□□□ -0.37
SSBP1-206ENST00000467681 PKNOX2Q96KN3 472 aa12.77□□□□□ -0.37
SSBP1-206ENST00000467681 LPAR4Q99677 370 aa12.77□□□□□ -0.37
SSBP1-206ENST00000467681 SMAD5Q99717 465 aaKnown RBP12.77□□□□□ -0.37
SSBP1-206ENST00000467681 ALOXE3Q9BYJ1 711 aa12.77□□□□□ -0.37
SSBP1-206ENST00000467681 LHPPQ9H008 270 aa12.77□□□□□ -0.37
SSBP1-206ENST00000467681 ZNF552Q9H707 407 aaPredicted RBP12.77□□□□□ -0.37
SSBP1-206ENST00000467681 RPF2Q9H7B2 306 aaKnown RBP12.77□□□□□ -0.37
SSBP1-206ENST00000467681 ZNF71Q9NQZ8 489 aaPredicted RBP12.77□□□□□ -0.37
SSBP1-206ENST00000467681 SIRT5Q9NXA8 310 aa12.77□□□□□ -0.37
SSBP1-206ENST00000467681 GPR83Q9NYM4 423 aa12.77□□□□□ -0.37
SSBP1-206ENST00000467681 G3BP2Q9UN86 482 aaKnown RBP12.77□□□□□ -0.37
SSBP1-206ENST00000467681 PCDHGB7Q9Y5F8 929 aa12.77□□□□□ -0.37
SSBP1-206ENST00000467681 TGFBR3LH3BV60 316 aa12.76□□□□□ -0.37
SSBP1-206ENST00000467681 SEC24DO94855 1032 aaPredicted RBP12.76□□□□□ -0.37
SSBP1-206ENST00000467681 PDGFAP04085 211 aa12.76□□□□□ -0.37
SSBP1-206ENST00000467681 SERPINE1P05121 402 aa12.76□□□□□ -0.37
SSBP1-206ENST00000467681 PRR35P0CG20 571 aa12.76□□□□□ -0.37
SSBP1-206ENST00000467681 PGDP52209 483 aa12.76□□□□□ -0.37
SSBP1-206ENST00000467681 WDR4P57081 412 aaKnown RBP12.76□□□□□ -0.37
SSBP1-206ENST00000467681 HMGCS1Q01581 520 aa12.76□□□□□ -0.37
SSBP1-206ENST00000467681 BIKQ13323 160 aa12.76□□□□□ -0.37
SSBP1-206ENST00000467681 UGT3A2Q3SY77 523 aa12.76□□□□□ -0.37
SSBP1-206ENST00000467681 HHATQ5VTY9 493 aa12.76□□□□□ -0.37
SSBP1-206ENST00000467681 CES4AQ5XG92 561 aa12.76□□□□□ -0.37
SSBP1-206ENST00000467681 PLAG1Q6DJT9 500 aa12.76□□□□□ -0.37
SSBP1-206ENST00000467681 CLEC6AQ6EIG7 209 aa12.76□□□□□ -0.37
SSBP1-206ENST00000467681 PAPD4Q6PIY7 484 aaKnown RBP12.76□□□□□ -0.37
SSBP1-206ENST00000467681 ATG14Q6ZNE5 492 aa12.76□□□□□ -0.37
SSBP1-206ENST00000467681 C1orf52Q8N6N3 182 aaKnown RBP12.76□□□□□ -0.37
SSBP1-206ENST00000467681 EFCAB3Q8N7B9 438 aa12.76□□□□□ -0.37
SSBP1-206ENST00000467681 AMER2Q8N7J2 671 aa12.76□□□□□ -0.37
SSBP1-206ENST00000467681 PPP1R14CQ8TAE6 165 aa12.76□□□□□ -0.37
SSBP1-206ENST00000467681 M1APQ8TC57 530 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms