RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 FTMTQ8N4E7 242 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 OR13C3Q8NGS6 347 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 NEDD4LQ96PU5 975 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 C17orf62Q9BQA9 187 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 TOR3AQ9H497 397 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 TMEM248Q9NWD8 314 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 SCP2D1Q9UJQ7 156 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 PCP4L1A6NKN8 68 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 BRINP1O60477 761 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 GGT2P36268 569 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 PBX1P40424 430 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 LASP1Q14847 261 aaKnown RBP8.38□□□□□ -1.07
HPS4-209ENST00000466781 TRAM2Q15035 370 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 OR2T5Q6IEZ7 315 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 PIM3Q86V86 326 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 OSTM1Q86WC4 334 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 RNF130Q86XS8 419 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 OR2T29Q8NH02 315 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 OR8S1Q8NH09 359 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 LRRC20Q8TCA0 184 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 DERL2Q9GZP9 239 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 OXSMQ9NWU1 459 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 RARRES3Q9UL19 164 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 ICKQ9UPZ9 632 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 EXOSC1Q9Y3B2 195 aaKnown RBP8.38□□□□□ -1.07
HPS4-209ENST00000466781 CMAHPQ9Y471 501 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 A0A0G2JMP0 313 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 A0A1W2PP55 124 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 DPPA5A6NC42 116 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 A8MT66 165 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 TSPAN4O14817 238 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 SLC22A1O15245 554 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 GBAP04062 536 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 HRH2P25021 359 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 RBMXP38159 391 aaKnown RBP8.38□□□□□ -1.07
HPS4-209ENST00000466781 DRICH1Q6PGQ1 229 aaPredicted RBP8.38□□□□□ -1.07
HPS4-209ENST00000466781 GID4Q8IVV7 300 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 UBQLNLQ8IYU4 475 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 C12orf76Q8N812 135 aaPredicted RBP8.38□□□□□ -1.07
HPS4-209ENST00000466781 OR4M2Q8NGB6 313 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 OR5L2Q8NGL0 311 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 BARD1Q99728 777 aaKnown RBP8.38□□□□□ -1.07
HPS4-209ENST00000466781 CD244Q9BZW8 370 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 MOV10Q9HCE1 1003 aaKnown RBP8.38□□□□□ -1.07
HPS4-209ENST00000466781 PPP1R14DQ9NXH3 145 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.38□□□□□ -1.07
HPS4-209ENST00000466781 GGT3PA6NGU5 568 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 ABLIM1O14639 778 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 TOR1BO14657 336 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 IFNA7P01567 189 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 ZNF12P17014 697 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 RPL26P61254 145 aaKnown RBP8.38□□□□□ -1.07
HPS4-209ENST00000466781 SF3B4Q15427 424 aaKnown RBP eCLIP8.38□□□□□ -1.071e-9■■■■□ 23.3
HPS4-209ENST00000466781 GALNT15Q8N3T1 639 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 SMG8Q8ND04 991 aaKnown RBP8.38□□□□□ -1.07
HPS4-209ENST00000466781 CGREF1Q99674 301 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 SGIP1Q9BQI5 828 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 FUZQ9BT04 418 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 DHDHQ9UQ10 334 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 TULP2O00295 520 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 GPR37L1O60883 481 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 ATE1O95260 518 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 HBQ1P09105 142 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 DLDP09622 509 aaKnown RBP8.38□□□□□ -1.07
HPS4-209ENST00000466781 TUBG1P23258 451 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 SRYQ05066 204 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 FBXO43Q4G163 708 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 SLC2A7Q6PXP3 512 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 C6orf120Q7Z4R8 191 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 ZC3HC1Q86WB0 502 aaKnown RBP8.38□□□□□ -1.07
HPS4-209ENST00000466781 TICAM1Q8IUC6 712 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 BANPQ8N9N5 519 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 STON2Q8WXE9 905 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 JPH3Q8WXH2 748 aaPredicted RBP8.38□□□□□ -1.07
HPS4-209ENST00000466781 THAP4Q8WY91 577 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 HSH2DQ96JZ2 352 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 TSGA13Q96PP4 275 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 SIX2Q9NPC8 291 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 PIGVQ9NUD9 493 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 NLE1Q9NVX2 485 aaPredicted RBP8.38□□□□□ -1.07
HPS4-209ENST00000466781 APOBEC3BQ9UH17 382 aaKnown RBP8.38□□□□□ -1.07
HPS4-209ENST00000466781 RNF11Q9Y3C5 154 aa8.38□□□□□ -1.07
HPS4-209ENST00000466781 AQP12BA6NM10 295 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 GJE1A6NN92 205 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 H7C417 338 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 TSPAN6O43657 245 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 SIX3O95343 332 aaPredicted RBP8.37□□□□□ -1.07
HPS4-209ENST00000466781 HLA-DPB1P04440 258 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 CREB5Q02930 508 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 GNMTQ14749 295 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 PLEKHN1Q494U1 663 aaPredicted RBP8.37□□□□□ -1.07
HPS4-209ENST00000466781 TMEM198Q66K66 360 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 KBTBD6Q86V97 674 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 AQP12AQ8IXF9 295 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.37□□□□□ -1.072e-7■■■□□ 19.1
HPS4-209ENST00000466781 TTTY10Q9BZA0 68 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 KATNBL1Q9H079 304 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 SPHK2Q9NRA0 654 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 KCNN3Q9UGI6 736 aa8.37□□□□□ -1.07
HPS4-209ENST00000466781 NOCTQ9UK39 431 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms