RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 NSG1A0A0A6YYJ2 146 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 BLACEA4D250 179 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 MKRN2OSH3BPM6 223 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 CHRNGP07510 517 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 UROSP10746 265 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 SFTPCP11686 197 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 CHN1P15882 459 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 CCL11P51671 97 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 TNFRSF17Q02223 184 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 ARL13AQ5H913 290 aaPredicted RBP19.08■□□□□ 0.64
SKA3-205ENST00000465471 CES4AQ5XG92 561 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 TCTN3Q6NUS6 607 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 COMMD6Q7Z4G1 85 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 FDCSPQ8NFU4 85 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 SREK1Q8WXA9 508 aaKnown RBP19.08■□□□□ 0.64
SKA3-205ENST00000465471 SLC39A7Q92504 469 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 C11orf24Q96F05 449 aaPredicted RBP19.08■□□□□ 0.64
SKA3-205ENST00000465471 PTCHD1Q96NR3 888 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 SH3GL2Q99962 352 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 TUBB6Q9BUF5 446 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 ZNF160Q9HCG1 818 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 KCNK9Q9NPC2 374 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 PRTFDC1Q9NRG1 225 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 NMRK1Q9NWW6 199 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 MS4A12Q9NXJ0 267 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 AHSPQ9NZD4 102 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 PHF11Q9UIL8 331 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 ATG4BQ9Y4P1 393 aa19.08■□□□□ 0.64
SKA3-205ENST00000465471 TMEM120BA0PK00 339 aa19.07■□□□□ 0.64
SKA3-205ENST00000465471 CLDN4O14493 209 aa19.07■□□□□ 0.64
SKA3-205ENST00000465471 FGF4P08620 206 aa19.07■□□□□ 0.64
SKA3-205ENST00000465471 MYBPC3Q14896 1274 aa19.07■□□□□ 0.64
SKA3-205ENST00000465471 SFT2D3Q587I9 215 aa19.07■□□□□ 0.64
SKA3-205ENST00000465471 KANK2Q63ZY3 851 aa19.07■□□□□ 0.64
SKA3-205ENST00000465471 PAGE2Q7Z2X7 111 aa19.07■□□□□ 0.64
SKA3-205ENST00000465471 TRIM46Q7Z4K8 759 aa19.07■□□□□ 0.64
SKA3-205ENST00000465471 GPR180Q86V85 440 aa19.07■□□□□ 0.64
SKA3-205ENST00000465471 NUDCD3Q8IVD9 361 aa19.07■□□□□ 0.64
SKA3-205ENST00000465471 C9orf43Q8TAL5 461 aaPredicted RBP19.07■□□□□ 0.64
SKA3-205ENST00000465471 CHTF18Q8WVB6 975 aa19.07■□□□□ 0.64
SKA3-205ENST00000465471 ARL8AQ96BM9 186 aa19.07■□□□□ 0.64
SKA3-205ENST00000465471 NUDT9Q9BW91 350 aa19.07■□□□□ 0.64
SKA3-205ENST00000465471 SHCBP1LQ9BZQ2 653 aa19.07■□□□□ 0.64
SKA3-205ENST00000465471 FBXW2Q9UKT8 454 aa19.07■□□□□ 0.64
SKA3-205ENST00000465471 SPACA6W5XKT8 324 aa19.07■□□□□ 0.64
SKA3-205ENST00000465471 IGHV3-20A0A0C4DH32 117 aa19.06■□□□□ 0.64
SKA3-205ENST00000465471 AZIN1O14977 448 aa19.06■□□□□ 0.64
SKA3-205ENST00000465471 PROM1O43490 865 aa19.06■□□□□ 0.64
SKA3-205ENST00000465471 CTNSO60931 367 aa19.06■□□□□ 0.64
SKA3-205ENST00000465471 FAM58BPP0C7Q3 252 aa19.06■□□□□ 0.64
SKA3-205ENST00000465471 CPN2P22792 545 aa19.06■□□□□ 0.64
SKA3-205ENST00000465471 SERPINB3P29508 390 aa19.06■□□□□ 0.64
SKA3-205ENST00000465471 WDR4P57081 412 aaKnown RBP19.06■□□□□ 0.64
SKA3-205ENST00000465471 CLEC6AQ6EIG7 209 aa19.06■□□□□ 0.64
SKA3-205ENST00000465471 EFCAB3Q8N7B9 438 aa19.06■□□□□ 0.64
SKA3-205ENST00000465471 SMAD5Q99717 465 aaKnown RBP19.06■□□□□ 0.64
SKA3-205ENST00000465471 SLC25A18Q9H1K4 315 aa19.06■□□□□ 0.64
SKA3-205ENST00000465471 EML4Q9HC35 981 aaKnown RBP19.06■□□□□ 0.64
SKA3-205ENST00000465471 SIRT5Q9NXA8 310 aa19.06■□□□□ 0.64
SKA3-205ENST00000465471 CCL27Q9Y4X3 112 aa19.06■□□□□ 0.64
SKA3-205ENST00000465471 CFAP46Q8IYW2 2715 aa19.06■□□□□ 0.64
SKA3-205ENST00000465471 A0A1W2PR48 441 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 SYNDIG1LA6NDD5 238 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 NPIPB8E9PQR5 432 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 K7EM74 188 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 SEC24DO94855 1032 aaPredicted RBP19.05■□□□□ 0.64
SKA3-205ENST00000465471 GBAP04062 536 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 PDGFAP04085 211 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 SERPINE1P05121 402 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 SERPINA7P05543 415 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 KLK1P06870 262 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 PRR35P0CG20 571 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 OR4D2P58180 307 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 IGLV3-21P80748 117 aaPredicted RBP19.05■□□□□ 0.64
SKA3-205ENST00000465471 HMGCS1Q01581 520 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 UGT3A2Q3SY77 523 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 C18orf63Q68DL7 685 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 PLAG1Q6DJT9 500 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 PAPD4Q6PIY7 484 aaKnown RBP19.05■□□□□ 0.64
SKA3-205ENST00000465471 CYP20A1Q6UW02 462 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 RIPOR1Q6ZS17 1223 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 HOMEZQ8IX15 550 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 PARP9Q8IXQ6 854 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 C1orf52Q8N6N3 182 aaKnown RBP19.05■□□□□ 0.64
SKA3-205ENST00000465471 AMER2Q8N7J2 671 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 SLC25A23Q9BV35 468 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 ZNF552Q9H707 407 aaPredicted RBP19.05■□□□□ 0.64
SKA3-205ENST00000465471 GPR83Q9NYM4 423 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 TP53TG5Q9Y2B4 290 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 PCDHGB7Q9Y5F8 929 aa19.05■□□□□ 0.64
SKA3-205ENST00000465471 TNRC6AQ8NDV7 1962 aaKnown RBP19.04■□□□□ 0.64
SKA3-205ENST00000465471 COL6A6A6NMZ7 2263 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 A6NL46 340 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 TMEM114B3SHH9 223 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 CRCPO75575 148 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 SASH3O75995 380 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 AIFM1O95831 613 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 CELA2AP08217 269 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 PRPH2P23942 346 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 ITGA3P26006 1051 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms