RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 TLX1P31314 330 aaPredicted RBP13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 SERPINB5P36952 375 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 HTR6P50406 440 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 HNRNPFP52597 415 aaKnown RBP13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 OR4D2P58180 307 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 GALNT1Q10472 559 aaPredicted RBP13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 SLC13A2Q13183 592 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 SFT2D3Q587I9 215 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 ARL13AQ5H913 290 aaPredicted RBP13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 MRM1Q6IN84 353 aaKnown RBP13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 SCIMPQ6UWF3 145 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 ZCCHC23Q6ZST2 131 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 SCUBE1Q8IWY4 988 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 EFCAB3Q8N7B9 438 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 OR6Y1Q8NGX8 325 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 C9orf43Q8TAL5 461 aaPredicted RBP13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 TLCD1Q96CP7 247 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 PKNOX2Q96KN3 472 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 TUBB6Q9BUF5 446 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 ACPTQ9BZG2 426 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 SEMA4CQ9C0C4 833 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 SLC25A18Q9H1K4 315 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 TNFRSF12AQ9NP84 129 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 NECTIN3Q9NQS3 549 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 LYARQ9NX58 379 aaKnown RBP13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 PHF11Q9UIL8 331 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 PCDHGA9Q9Y5G4 932 aaKnown RBP13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 IGKV3D-11A0A0A0MRZ8 115 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 TCRBV16S1A1N1A0A5B0 115 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 TMEM120BA0PK00 339 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 ARHGAP10A1A4S6 786 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 BLACEA4D250 179 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 AZIN1O14977 448 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 PROM1O43490 865 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 KALRNO60229 2985 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 SEC24DO94855 1032 aaPredicted RBP13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 GBAP04062 536 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 CHRNGP07510 517 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 CHN1P15882 459 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 BUD31P41223 144 aaPredicted RBP13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 SLC18A1P54219 525 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 HNRNPH2P55795 449 aaKnown RBP13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 Q0VFX4 171 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 TBL3Q12788 808 aaKnown RBP13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 RAPSNQ13702 412 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 MYBPC3Q14896 1274 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 CCNYL2Q5T2Q4 361 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 AGBL2Q5U5Z8 902 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 IRAK1BP1Q5VVH5 260 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 CLEC6AQ6EIG7 209 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 TCTN3Q6NUS6 607 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 COMMD6Q7Z4G1 85 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 HOMEZQ8IX15 550 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 KBTBD2Q8IY47 623 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 ANKRD42Q8N9B4 389 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 PPP1R14CQ8TAE6 165 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 CHTF18Q8WVB6 975 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 THOC3Q96J01 351 aaKnown RBP13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 IMMP1LQ96LU5 166 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 LPAR4Q99677 370 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 PAIP2Q9BPZ3 127 aaKnown RBP13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 WDR77Q9BQA1 342 aaPredicted RBP13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 NUDT9Q9BW91 350 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 RPF2Q9H7B2 306 aaKnown RBP13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 VIPAS39Q9H9C1 493 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 MLXIPLQ9NP71 852 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 ZNF71Q9NQZ8 489 aaPredicted RBP13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 GPR83Q9NYM4 423 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 ATG4BQ9Y4P1 393 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 ASB4Q9Y574 426 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 DOCK10Q96BY6 2186 aa13.62□□□□□ -0.23
SQSTM1-205ENST00000464493 TLN1Q9Y490 2541 aaKnown RBP13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 A0A1W2PR48 441 aa13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 EIF4E1BA6NMX2 242 aaKnown RBP13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 K7EM74 188 aa13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 KLHL41O60662 606 aa13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 SERPINA7P05543 415 aa13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 FGF4P08620 206 aa13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 TPP2P29144 1249 aaPredicted RBP13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 PGDP52209 483 aa13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 HMGCS1Q01581 520 aa13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 TNFRSF17Q02223 184 aa13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 STX4Q12846 297 aa13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 CHI3L2Q15782 390 aa13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 LACTB2Q53H82 288 aaPredicted RBP13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 HHATQ5VTY9 493 aa13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 C18orf63Q68DL7 685 aa13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 PAPD4Q6PIY7 484 aaKnown RBP13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 RIPOR1Q6ZS17 1223 aa13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 TRIM46Q7Z4K8 759 aa13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 CLNKQ7Z7G1 428 aa13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 CLYBLQ8N0X4 340 aa13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 C1orf52Q8N6N3 182 aaKnown RBP13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 TANKQ92844 425 aa13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 ARL8AQ96BM9 186 aa13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 LHPPQ9H008 270 aa13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 TP53TG5Q9Y2B4 290 aa13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 FIS1Q9Y3D6 152 aa13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 TRAF6Q9Y4K3 522 aa13.61□□□□□ -0.23
SQSTM1-205ENST00000464493 CLDN16Q9Y5I7 305 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms