RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 ZFAND5O76080 213 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 TPOP07202 933 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 STMN1P16949 149 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 GSTM2P28161 218 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 PTGS2P35354 604 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 GP5P40197 560 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 SOX3P41225 446 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 MSH2P43246 934 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 RAB10P61026 200 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 ATP6V0D1P61421 351 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 BMPR2Q13873 1038 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 ELAVL1Q15717 326 aaKnown RBP13.47□□□□□ -0.25
ALMS1-202ENST00000464408 ZNF750Q32MQ0 723 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 EMC4Q5J8M3 183 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 IL20RBQ6UXL0 311 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 C3orf62Q6ZUJ4 267 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 CTAGE3PQ8IX95 158 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 PSD4Q8NDX1 1056 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 C16orf52Q8NHV5 167 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 PHF10Q8WUB8 498 aaKnown RBP13.47□□□□□ -0.25
ALMS1-202ENST00000464408 KIAA1191Q96A73 305 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 SDCCAG3Q96C92 435 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 SEC16BQ96JE7 1060 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 RASL10BQ96S79 203 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 CCDC77Q9BR77 488 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 EFCAB11Q9BUY7 163 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 CAPS2Q9BXY5 557 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 MS4A8Q9BY19 250 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 ALOXE3Q9BYJ1 711 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 CD244Q9BZW8 370 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 PITHD1Q9GZP4 211 aaPredicted RBP13.47□□□□□ -0.25
ALMS1-202ENST00000464408 DEFB127Q9H1M4 99 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 CNOT10Q9H9A5 744 aaKnown RBP13.47□□□□□ -0.25
ALMS1-202ENST00000464408 RNF112Q9ULX5 631 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 ERVK-11Q9UQG0 969 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 YARS2Q9Y2Z4 477 aaKnown RBP13.47□□□□□ -0.25
ALMS1-202ENST00000464408 A0A088AWK7 358 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 FAM166BA8MTA8 275 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 A8MVJ9 347 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 C17orf105B2RV13 164 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 UBXN8O00124 270 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 CTNSO60931 367 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 ETHE1O95571 254 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 TUBB4AP04350 444 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 SLC35E2BP0CK96 405 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 ZNF10P21506 573 aaPredicted RBP13.46□□□□□ -0.25
ALMS1-202ENST00000464408 ATP5A1P25705 553 aaKnown RBP13.46□□□□□ -0.25
ALMS1-202ENST00000464408 HK2P52789 917 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 IRF8Q02556 426 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 CALCOCO2Q13137 446 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 KBTBD12Q3ZCT8 623 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 CDKL4Q5MAI5 379 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 CEP128Q6ZU80 1094 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 OR4N5Q8IXE1 308 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 TMEM132CQ8N3T6 1108 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 ACOT4Q8N9L9 421 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 BBOF1Q8ND07 529 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 SPATA4Q8NEY3 305 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 SLC2A12Q8TD20 617 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 DOK4Q8TEW6 326 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 ZNF473Q8WTR7 871 aaKnown RBP13.46□□□□□ -0.25
ALMS1-202ENST00000464408 ASB15Q8WXK1 588 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 CDKL2Q92772 493 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 ANKRD9Q96BM1 317 aaPredicted RBP13.46□□□□□ -0.25
ALMS1-202ENST00000464408 OR8D2Q9GZM6 311 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 TIMMDC1Q9NPL8 285 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 PLSCR2Q9NRY7 297 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 IGSF5Q9NSI5 407 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 HPF1Q9NWY4 346 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 TXNDC16Q9P2K2 825 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 MYOTQ9UBF9 498 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 VTI1BQ9UEU0 232 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 MRPS33Q9Y291 106 aaKnown RBP13.46□□□□□ -0.25
ALMS1-202ENST00000464408 LIPGQ9Y5X9 500 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 CLCA3PQ9Y6N3 262 aa13.46□□□□□ -0.25
ALMS1-202ENST00000464408 HIVEP1P15822 2718 aa13.45□□□□□ -0.26
ALMS1-202ENST00000464408 FAM187AA6NFU0 413 aa13.45□□□□□ -0.26
ALMS1-202ENST00000464408 SUPT3HB4E1H0 165 aa13.45□□□□□ -0.26
ALMS1-202ENST00000464408 SUPT3HO75486 399 aa13.45□□□□□ -0.26
ALMS1-202ENST00000464408 PRKRAO75569 313 aaKnown RBP13.45□□□□□ -0.26
ALMS1-202ENST00000464408 TGFB1P01137 390 aa13.45□□□□□ -0.26
ALMS1-202ENST00000464408 PCNAP12004 261 aa13.45□□□□□ -0.26
ALMS1-202ENST00000464408 PPIAP62937 165 aaKnown RBP13.45□□□□□ -0.26
ALMS1-202ENST00000464408 IRF9Q00978 393 aa13.45□□□□□ -0.26
ALMS1-202ENST00000464408 STX4Q12846 297 aa13.45□□□□□ -0.26
ALMS1-202ENST00000464408 E2F2Q14209 437 aa13.45□□□□□ -0.26
ALMS1-202ENST00000464408 SLMAPQ14BN4 828 aa13.45□□□□□ -0.26
ALMS1-202ENST00000464408 ZDHHC24Q6UX98 284 aa13.45□□□□□ -0.26
ALMS1-202ENST00000464408 HSDL2Q6YN16 418 aa13.45□□□□□ -0.26
ALMS1-202ENST00000464408 DGAT2L6Q6ZPD8 337 aa13.45□□□□□ -0.26
ALMS1-202ENST00000464408 LRRC70Q7Z2Q7 622 aa13.45□□□□□ -0.26
ALMS1-202ENST00000464408 ISCA2Q86U28 154 aa13.45□□□□□ -0.26
ALMS1-202ENST00000464408 CCDC25Q86WR0 208 aa13.45□□□□□ -0.26
ALMS1-202ENST00000464408 C17orf53Q8N3J3 647 aaPredicted RBP13.45□□□□□ -0.26
ALMS1-202ENST00000464408 PPM1NQ8N819 430 aa13.45□□□□□ -0.26
ALMS1-202ENST00000464408 ACBD4Q8NC06 268 aa13.45□□□□□ -0.26
ALMS1-202ENST00000464408 OR2M7Q8NG81 312 aa13.45□□□□□ -0.26
ALMS1-202ENST00000464408 SCYL1Q96KG9 808 aa13.45□□□□□ -0.26
ALMS1-202ENST00000464408 KCNC2Q96PR1 638 aa13.45□□□□□ -0.26
ALMS1-202ENST00000464408 ATOH8Q96SQ7 321 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms