RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 ACAD8Q9UKU7 415 aa19.2■□□□□ 0.66
CPSF7-209ENST00000463244 DAPP1Q9UN19 280 aa19.2■□□□□ 0.66
CPSF7-209ENST00000463244 NSD1Q96L73 2696 aaPredicted RBP19.2■□□□□ 0.66
CPSF7-209ENST00000463244 MPDZO75970 2070 aa19.2■□□□□ 0.66
CPSF7-209ENST00000463244 NPEPPSL1A6NEC2 478 aa19.19■□□□□ 0.66
CPSF7-209ENST00000463244 ZNF354AO60765 605 aaPredicted RBP19.19■□□□□ 0.66
CPSF7-209ENST00000463244 CTNSO60931 367 aa19.19■□□□□ 0.66
CPSF7-209ENST00000463244 H2AFYO75367 372 aaKnown RBP19.19■□□□□ 0.66
CPSF7-209ENST00000463244 CELA3AP09093 270 aa19.19■□□□□ 0.66
CPSF7-209ENST00000463244 CERS1P27544 350 aa19.19■□□□□ 0.66
CPSF7-209ENST00000463244 HNMTP50135 292 aa19.19■□□□□ 0.66
CPSF7-209ENST00000463244 PLA2G16P53816 162 aa19.19■□□□□ 0.66
CPSF7-209ENST00000463244 PPP2R2AP63151 447 aa19.19■□□□□ 0.66
CPSF7-209ENST00000463244 SLBPQ14493 270 aaKnown RBP eCLIP19.19■□□□□ 0.66
CPSF7-209ENST00000463244 ADPRMQ3LIE5 342 aa19.19■□□□□ 0.66
CPSF7-209ENST00000463244 FAM47EQ6ZV65 393 aa19.19■□□□□ 0.66
CPSF7-209ENST00000463244 ZNF321PQ8N8H1 164 aa19.19■□□□□ 0.66
CPSF7-209ENST00000463244 OR2L5Q8NG80 312 aa19.19■□□□□ 0.66
CPSF7-209ENST00000463244 OR8K3Q8NH51 312 aa19.19■□□□□ 0.66
CPSF7-209ENST00000463244 OR14A16Q8NHC5 309 aa19.19■□□□□ 0.66
CPSF7-209ENST00000463244 GRK7Q8WTQ7 553 aa19.19■□□□□ 0.66
CPSF7-209ENST00000463244 ANKRD7Q92527 254 aa19.19■□□□□ 0.66
CPSF7-209ENST00000463244 SERINC2Q96SA4 455 aa19.19■□□□□ 0.66
CPSF7-209ENST00000463244 EGFL8Q99944 293 aa19.19■□□□□ 0.66
CPSF7-209ENST00000463244 REXO4Q9GZR2 422 aaKnown RBP19.19■□□□□ 0.66
CPSF7-209ENST00000463244 SACM1LQ9NTJ5 587 aa19.19■□□□□ 0.66
CPSF7-209ENST00000463244 ATP6AP2A0A1C7CYW4 349 aa19.18■□□□□ 0.66
CPSF7-209ENST00000463244 CLEC3AO75596 197 aa19.18■□□□□ 0.66
CPSF7-209ENST00000463244 ATP6AP2O75787 350 aa19.18■□□□□ 0.66
CPSF7-209ENST00000463244 WDR47O94967 919 aa19.18■□□□□ 0.66
CPSF7-209ENST00000463244 GDF5P43026 501 aa19.18■□□□□ 0.66
CPSF7-209ENST00000463244 SLC6A12P48065 614 aa19.18■□□□□ 0.66
CPSF7-209ENST00000463244 DNASE1L1P49184 302 aa19.18■□□□□ 0.66
CPSF7-209ENST00000463244 FNTAP49354 379 aa19.18■□□□□ 0.66
CPSF7-209ENST00000463244 MAN2A2P49641 1150 aa19.18■□□□□ 0.66
CPSF7-209ENST00000463244 RNF4P78317 190 aa19.18■□□□□ 0.66
CPSF7-209ENST00000463244 RCN2Q14257 317 aa19.18■□□□□ 0.66
CPSF7-209ENST00000463244 CEBPEQ15744 281 aa19.18■□□□□ 0.66
CPSF7-209ENST00000463244 C1orf185Q5T7R7 199 aa19.18■□□□□ 0.66
CPSF7-209ENST00000463244 TRIM40Q6P9F5 258 aa19.18■□□□□ 0.66
CPSF7-209ENST00000463244 SARAFQ96BY9 339 aa19.18■□□□□ 0.66
CPSF7-209ENST00000463244 PBKQ96KB5 322 aa19.18■□□□□ 0.66
CPSF7-209ENST00000463244 NAP1L3Q99457 506 aaPredicted RBP19.18■□□□□ 0.66
CPSF7-209ENST00000463244 GPATCH1Q9BRR8 931 aaKnown RBP19.18■□□□□ 0.66
CPSF7-209ENST00000463244 ALOXE3Q9BYJ1 711 aa19.18■□□□□ 0.66
CPSF7-209ENST00000463244 OR8D2Q9GZM6 311 aa19.18■□□□□ 0.66
CPSF7-209ENST00000463244 CLEC4MQ9H2X3 399 aaPredicted RBP19.18■□□□□ 0.66
CPSF7-209ENST00000463244 TUBA8Q9NY65 449 aaPredicted RBP19.18■□□□□ 0.66
CPSF7-209ENST00000463244 OARD1Q9Y530 152 aa19.18■□□□□ 0.66
CPSF7-209ENST00000463244 NCKAP5O14513 1909 aa19.17■□□□□ 0.66
CPSF7-209ENST00000463244 MYOCOSA0A1B0GUC4 107 aa19.17■□□□□ 0.66
CPSF7-209ENST00000463244 FAM47E-STBD1D6RA91 191 aa19.17■□□□□ 0.66
CPSF7-209ENST00000463244 P04436 131 aa19.17■□□□□ 0.66
CPSF7-209ENST00000463244 FREM3P0C091 2139 aa19.17■□□□□ 0.66
CPSF7-209ENST00000463244 CCL3P10147 92 aa19.17■□□□□ 0.66
CPSF7-209ENST00000463244 HPDP32754 393 aaPredicted RBP19.17■□□□□ 0.66
CPSF7-209ENST00000463244 MTTPP55157 894 aa19.17■□□□□ 0.66
CPSF7-209ENST00000463244 SNTB1Q13884 538 aaKnown RBP19.17■□□□□ 0.66
CPSF7-209ENST00000463244 SLC10A1Q14973 349 aa19.17■□□□□ 0.66
CPSF7-209ENST00000463244 EFTUD2Q15029 972 aaKnown RBP eCLIP19.17■□□□□ 0.662e-7■■■■■ 34.4
CPSF7-209ENST00000463244 C18orf21Q32NC0 220 aaPredicted RBP19.17■□□□□ 0.66
CPSF7-209ENST00000463244 WLSQ5T9L3 541 aa19.17■□□□□ 0.66
CPSF7-209ENST00000463244 ABHD17CQ6PCB6 329 aa19.17■□□□□ 0.66
CPSF7-209ENST00000463244 TRMT10BQ6PF06 316 aaKnown RBP19.17■□□□□ 0.66
CPSF7-209ENST00000463244 OPN5Q6U736 354 aa19.17■□□□□ 0.66
CPSF7-209ENST00000463244 VN1R5Q7Z5H4 357 aa19.17■□□□□ 0.66
CPSF7-209ENST00000463244 WDR53Q7Z5U6 358 aaPredicted RBP19.17■□□□□ 0.66
CPSF7-209ENST00000463244 KRT78Q8N1N4 520 aa19.17■□□□□ 0.66
CPSF7-209ENST00000463244 NKAPQ8N5F7 415 aaKnown RBP19.17■□□□□ 0.66
CPSF7-209ENST00000463244 SLC2A12Q8TD20 617 aa19.17■□□□□ 0.66
CPSF7-209ENST00000463244 CNPPD1Q9BV87 410 aa19.17■□□□□ 0.66
CPSF7-209ENST00000463244 PITHD1Q9GZP4 211 aaPredicted RBP19.17■□□□□ 0.66
CPSF7-209ENST00000463244 LDAHQ9H6V9 325 aa19.17■□□□□ 0.66
CPSF7-209ENST00000463244 NT5DC2Q9H857 520 aa19.17■□□□□ 0.66
CPSF7-209ENST00000463244 RASSF1Q9NS23 344 aa19.17■□□□□ 0.66
CPSF7-209ENST00000463244 B4GALT7Q9UBV7 327 aa19.17■□□□□ 0.66
CPSF7-209ENST00000463244 ATG4BQ9Y4P1 393 aa19.17■□□□□ 0.66
CPSF7-209ENST00000463244 NINQ8N4C6 2090 aa19.16■□□□□ 0.66
CPSF7-209ENST00000463244 C17orf105B2RV13 164 aa19.16■□□□□ 0.66
CPSF7-209ENST00000463244 PGRMC1O00264 195 aaKnown RBP19.16■□□□□ 0.66
CPSF7-209ENST00000463244 DNALI1O14645 258 aaPredicted RBP19.16■□□□□ 0.66
CPSF7-209ENST00000463244 HCN1O60741 890 aa19.16■□□□□ 0.66
CPSF7-209ENST00000463244 ENDOUP21128 410 aaKnown RBP19.16■□□□□ 0.66
CPSF7-209ENST00000463244 KIR2DL3P43628 341 aa19.16■□□□□ 0.66
CPSF7-209ENST00000463244 STX4Q12846 297 aa19.16■□□□□ 0.66
CPSF7-209ENST00000463244 FOXD4Q12950 439 aaPredicted RBP19.16■□□□□ 0.66
CPSF7-209ENST00000463244 PPP1R7Q15435 360 aa19.16■□□□□ 0.66
CPSF7-209ENST00000463244 RIPPLY2Q5TAB7 128 aa19.16■□□□□ 0.66
CPSF7-209ENST00000463244 MMP21Q8N119 569 aa19.16■□□□□ 0.66
CPSF7-209ENST00000463244 OR5L2Q8NGL0 311 aa19.16■□□□□ 0.66
CPSF7-209ENST00000463244 SLCO2A1Q92959 643 aa19.16■□□□□ 0.66
CPSF7-209ENST00000463244 RHBDF1Q96CC6 855 aa19.16■□□□□ 0.66
CPSF7-209ENST00000463244 RMND5BQ96G75 393 aaPredicted RBP19.16■□□□□ 0.66
CPSF7-209ENST00000463244 SEMA4BQ9NPR2 832 aaPredicted RBP19.16■□□□□ 0.66
CPSF7-209ENST00000463244 DLL4Q9NR61 685 aa19.16■□□□□ 0.66
CPSF7-209ENST00000463244 CRIM1Q9NZV1 1036 aa19.16■□□□□ 0.66
CPSF7-209ENST00000463244 TRGV5A0A0B4J1U4 118 aa19.15■□□□□ 0.66
CPSF7-209ENST00000463244 ANKDD1BA6NHY2 528 aa19.15■□□□□ 0.66
CPSF7-209ENST00000463244 FAM155BO75949 473 aa19.15■□□□□ 0.66
CPSF7-209ENST00000463244 GABRA1P14867 456 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms