RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 SNNO75324 88 aaPredicted RBP13.16□□□□□ -0.3
HDLBP-229ENST00000460826 SKAP2O75563 359 aaPredicted RBP13.16□□□□□ -0.3
HDLBP-229ENST00000460826 JUNP05412 331 aaKnown RBP13.16□□□□□ -0.3
HDLBP-229ENST00000460826 FAM58BPP0C7Q3 252 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 LINC00032P0C843 101 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 MAOAP21397 527 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 CPN2P22792 545 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 JAK1P23458 1154 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 IMPG1Q17R60 797 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 C18orf63Q68DL7 685 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 CYP20A1Q6UW02 462 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 QSOX2Q6ZRP7 698 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 RIPOR1Q6ZS17 1223 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 RNF165Q6ZSG1 346 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 ANKRD37Q7Z713 158 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 GPR180Q86V85 440 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 SCUBE1Q8IWY4 988 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 OR11G2Q8NGC1 345 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 ADAMTS18Q8TE60 1221 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 THAP4Q8WY91 577 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 EXTL1Q92935 676 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 C11orf24Q96F05 449 aaPredicted RBP13.16□□□□□ -0.3
HDLBP-229ENST00000460826 PTCHD1Q96NR3 888 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 MANSC1Q9H8J5 431 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 PNPOQ9NVS9 261 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 NMRK1Q9NWW6 199 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 LYARQ9NX58 379 aaKnown RBP13.16□□□□□ -0.3
HDLBP-229ENST00000460826 TEX10Q9NXF1 929 aaPredicted RBP13.16□□□□□ -0.3
HDLBP-229ENST00000460826 GIMAP2Q9UG22 337 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 HAO1Q9UJM8 370 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 FBXL4Q9UKA2 621 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 ADAM29Q9UKF5 820 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 RAP2CQ9Y3L5 183 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 KCNMB2Q9Y691 235 aa13.16□□□□□ -0.3
HDLBP-229ENST00000460826 LOC102723996A0A087X1L8 192 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 IGKV3D-11A0A0A0MRZ8 115 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 MYOCOSA0A1B0GUC4 107 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 A0A1W2PR48 441 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 ARHGAP10A1A4S6 786 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 PROM1O43490 865 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 PRMT3O60678 531 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 AIFM1O95831 613 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 CHEK2O96017 543 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 C8orf89P0DMQ9 161 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 COX6A1P12074 109 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 ACPPP15309 386 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 NR1D1P20393 614 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 TNFRSF17Q02223 184 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 ACSM2AQ08AH3 577 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 PCOLCEQ15113 449 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 LINC00303Q3SY05 128 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 XKR7Q5GH72 579 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 SPDYAQ5MJ70 313 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 CCNYL2Q5T2Q4 361 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 ACSM2BQ68CK6 577 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 PAGE2Q7Z2X7 111 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 CLNKQ7Z7G1 428 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 DDIASQ8IXT1 998 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 ZNF595Q8IYB9 648 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 RAB3IL1Q8TBN0 382 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 TTC9Q92623 222 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 ZNF75CPQ92670 426 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-229ENST00000460826 C3orf30Q96M34 536 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 CATSPER2Q96P56 530 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 EBPLQ9BY08 206 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 TRIM55Q9BYV6 548 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 ILKAPQ9H0C8 392 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-229ENST00000460826 PRDM9Q9NQV7 894 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 PRTFDC1Q9NRG1 225 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 PHF11Q9UIL8 331 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-229ENST00000460826 MMACHCQ9Y4U1 282 aa13.15□□□□□ -0.3
HDLBP-229ENST00000460826 FAM208BQ5VWN6 2430 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 GLOD5A6NK44 160 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 NPIPB8E9PQR5 432 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 SLC28A1O00337 649 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 PEX12O00623 359 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 ATP8B1O43520 1251 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 PCDH7O60245 1069 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 LDB3O75112 727 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 DNAJB5O75953 348 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 RSL1D1O76021 490 aaKnown RBP13.14□□□□□ -0.31
HDLBP-229ENST00000460826 CYC1P08574 325 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 PRPH2P23942 346 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 PPP2R1BP30154 601 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 TIA1P31483 386 aaKnown RBP eCLIP13.14□□□□□ -0.31
HDLBP-229ENST00000460826 RPL14P50914 215 aaKnown RBP13.14□□□□□ -0.31
HDLBP-229ENST00000460826 MAPK12P53778 367 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 HSD17B7P56937 341 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 OCRLQ01968 901 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 ID2Q02363 134 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 NSDHLQ15738 373 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 SPIN4Q56A73 249 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 ATG16L1Q676U5 607 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 CPEB2Q7Z5Q1 589 aaKnown RBP13.14□□□□□ -0.31
HDLBP-229ENST00000460826 TRIM42Q8IWZ5 723 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 OR4N5Q8IXE1 308 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 MMP21Q8N119 569 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 METTL21AQ8WXB1 218 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 NACC2Q96BF6 587 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms