RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 RAVER2Q9HCJ3 691 aaKnown RBP2.88□□□□□ -1.95
R3HDM1-212ENST00000456040 NLGN3Q9NZ94 848 aa2.88□□□□□ -1.95
R3HDM1-212ENST00000456040 CLCA3PQ9Y6N3 262 aa2.88□□□□□ -1.95
R3HDM1-212ENST00000456040 GRIN2BQ13224 1484 aa2.88□□□□□ -1.95
R3HDM1-212ENST00000456040 ACEP12821 1306 aa2.88□□□□□ -1.95
R3HDM1-212ENST00000456040 EFCAB5A4FU69 1503 aa2.88□□□□□ -1.95
R3HDM1-212ENST00000456040 ABCA7Q8IZY2 2146 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 ERICH4A6NGS2 130 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 SHISA9B4DS77 424 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 MCF2LO15068 1137 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 ST8SIA3O43173 380 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 TLX2O43763 284 aaPredicted RBP2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 AKAP3O75969 853 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 TRIM16O95361 564 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 PTBP3O95758 552 aaKnown RBP2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 IGKV3-15P01624 115 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 SERPING1P05155 500 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 DNAH10OSP0CZ25 163 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 PRG2P13727 222 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 RPS2P15880 293 aaKnown RBP2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 EPORP19235 508 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 HNMTP50135 292 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 OR1D5P58170 312 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 KIAA1024LP59773 190 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 GMFBP60983 142 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 ZNF146Q15072 292 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 RBBP7Q16576 425 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 DUSP5Q16690 384 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 SHROOM1Q2M3G4 852 aaPredicted RBP2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 FAM106AQ4KMX7 169 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 CEP55Q53EZ4 464 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 LACTB2Q53H82 288 aaPredicted RBP2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 SEL1L3Q68CR1 1132 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 OR4C11Q6IEV9 310 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 MOXD1Q6UVY6 613 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 KRTAP5-5Q701N2 237 aaPredicted RBP2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 LPCAT2Q7L5N7 544 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 TMEM110Q86TL2 294 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 ANKRD13CQ8N6S4 541 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 MRPL43Q8N983 215 aaKnown RBP2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 UXS1Q8NBZ7 420 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 GMCL1P1Q8NEA9 526 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 PSMA8Q8TAA3 256 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 CCDC110Q8TBZ0 833 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 SLC13A3Q8WWT9 602 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 ERO1AQ96HE7 468 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 CRACR2AQ9BSW2 395 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 KATNB1Q9BVA0 655 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 TMEM206Q9H813 350 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 SLC35D1Q9NTN3 355 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 CYP39A1Q9NYL5 469 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 PKD2L2Q9NZM6 624 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 TRPC4Q9UBN4 977 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 SPASTQ9UBP0 616 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 STX8Q9UNK0 236 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 KIF3AQ9Y496 699 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 URB2Q14146 1524 aaKnown RBP2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 CLSPNQ9HAW4 1339 aa2.87□□□□□ -1.95
R3HDM1-212ENST00000456040 NESP48681 1621 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 MAGI1Q96QZ7 1491 aaPredicted RBP2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 A0A0A6YYC8 382 aaPredicted RBP2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 CLRN2A0PK11 232 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 MTMR11A4FU01 709 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 OOEPA6NGQ2 149 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 C17orf105B2RV13 164 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 I3L1I5 382 aaPredicted RBP2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 IFIT3O14879 490 aaKnown RBP2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 GPRIN2O60269 458 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 KLHL41O60662 606 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 GALR3O60755 368 aaPredicted RBP2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 NME6O75414 186 aaPredicted RBP2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 SAP30O75446 220 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 MTRF1O75570 445 aaKnown RBP2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 PRDM1O75626 825 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 SIX3O95343 332 aaPredicted RBP2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 HPP00738 406 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 RLN1P04808 185 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 F3P13726 295 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 NCF1P14598 390 aaPredicted RBP2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 GP9P14770 177 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 ETS1P14921 441 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 SOAT1P35610 550 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 ACAA2P42765 397 aaKnown RBP2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 KHKP50053 298 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 NDST2P52849 883 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 SNU13P55769 128 aaKnown RBP2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 ST8SIA6P61647 398 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 TRA2BP62995 288 aaKnown RBP2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 FKBP3Q00688 224 aaKnown RBP2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 INAQ16352 499 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 SGCBQ16585 318 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 CCDC183Q5T5S1 534 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 C12orf60Q5U649 245 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 FAM91A1Q658Y4 838 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 SLC25A24Q6NUK1 477 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 ENPP7Q6UWV6 458 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 MFSD7Q6UXD7 560 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 MIER3Q7Z3K6 550 aa2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 CPEB2Q7Z5Q1 589 aaKnown RBP2.86□□□□□ -1.95
R3HDM1-212ENST00000456040 AMIGO1Q86WK6 493 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms