RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 PDYNP01213 254 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 ITGAMP11215 1152 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 ICAM2P13598 275 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 CD97P48960 835 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 HTR6P50406 440 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 NAGLUP54802 743 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 OR4D2P58180 307 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 SLC26A5P58743 744 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 GALNT1Q10472 559 aaPredicted RBP13.28□□□□□ -0.28
HDAC4-205ENST00000454542 TBL3Q12788 808 aaKnown RBP13.28□□□□□ -0.28
HDAC4-205ENST00000454542 CRB2Q5IJ48 1285 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 H3F3CQ6NXT2 135 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 CROCCP2Q86T23 111 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 PTRH1Q86Y79 214 aaKnown RBP13.28□□□□□ -0.28
HDAC4-205ENST00000454542 C10orf107Q8IVU9 208 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 METTL4Q8N3J2 472 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 AMER2Q8N7J2 671 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 NFAM1Q8NET5 270 aaPredicted RBP13.28□□□□□ -0.28
HDAC4-205ENST00000454542 M1APQ8TC57 530 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 BRIX1Q8TDN6 353 aaKnown RBP13.28□□□□□ -0.28
HDAC4-205ENST00000454542 TCP10LQ8TDR4 215 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 SELENOMQ8WWX9 145 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 SMC6Q96SB8 1091 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 IQCGQ9H095 443 aaKnown RBP13.28□□□□□ -0.28
HDAC4-205ENST00000454542 ZBTB20Q9HC78 741 aaPredicted RBP13.28□□□□□ -0.28
HDAC4-205ENST00000454542 MMP25Q9NPA2 562 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 MS4A12Q9NXJ0 267 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 SLC17A7Q9P2U7 560 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 ASB4Q9Y574 426 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 ACTL7BQ9Y614 415 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 RGS16O15492 202 aaPredicted RBP13.27□□□□□ -0.29
HDAC4-205ENST00000454542 CTNSO60931 367 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 SPAG7O75391 227 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 KRT6AP02538 564 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 KRT6BP04259 564 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 TPP2P29144 1249 aaPredicted RBP13.27□□□□□ -0.29
HDAC4-205ENST00000454542 CASRP41180 1078 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 KRT6CP48668 564 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 FOXA1P55317 472 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 SLAMF1Q13291 335 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 MFAP5Q13361 173 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 CEP85LQ5SZL2 805 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 AGAP7PQ5VUJ5 663 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 SLC6A19Q695T7 634 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 TTC19Q6DKK2 380 aaPredicted RBP13.27□□□□□ -0.29
HDAC4-205ENST00000454542 RNF165Q6ZSG1 346 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 CCNYL1Q8N7R7 359 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 CCDC63Q8NA47 563 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 Q8NA96 180 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 OR6Y1Q8NGX8 325 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 ELP5Q8TE02 316 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 PGM2Q96G03 612 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 AGAP4Q96P64 663 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 KCNA7Q96RP8 456 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 TRMOQ9BU70 441 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 GATA5Q9BWX5 397 aaPredicted RBP13.27□□□□□ -0.29
HDAC4-205ENST00000454542 MRPL1Q9BYD6 325 aaKnown RBP13.27□□□□□ -0.29
HDAC4-205ENST00000454542 TNFRSF12AQ9NP84 129 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 ADAP2Q9NPF8 381 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 RRAGDQ9NQL2 400 aaPredicted RBP13.27□□□□□ -0.29
HDAC4-205ENST00000454542 ATG4BQ9Y4P1 393 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 SPACA6W5XKT8 324 aa13.27□□□□□ -0.29
HDAC4-205ENST00000454542 CLDN4O14493 209 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 CTIFO43310 598 aaKnown RBP13.26□□□□□ -0.29
HDAC4-205ENST00000454542 PROM1O43490 865 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 TRIM13O60858 407 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 PLA2G2AP14555 144 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 CPN2P22792 545 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 HMOX2P30519 316 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 ALDH3A1P30838 453 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 ELAVL1Q15717 326 aaKnown RBP13.26□□□□□ -0.29
HDAC4-205ENST00000454542 BTBD16Q32M84 506 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 NADK2Q4G0N4 442 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 IRAK1BP1Q5VVH5 260 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 ISLR2Q6UXK2 745 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 Q6ZS92 163 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 COMMD6Q7Z4G1 85 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 GPR180Q86V85 440 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 EXOC3L1Q86VI1 746 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 ARMC10Q8N2F6 343 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 EFCAB3Q8N7B9 438 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 GBP7Q8N8V2 638 aaPredicted RBP13.26□□□□□ -0.29
HDAC4-205ENST00000454542 APCDD1LQ8NCL9 501 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 METTL6Q8TCB7 284 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 TM9SF4Q92544 642 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 PNPLA2Q96AD5 504 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 ANKRD9Q96BM1 317 aaPredicted RBP13.26□□□□□ -0.29
HDAC4-205ENST00000454542 MTFMTQ96DP5 389 aaKnown RBP13.26□□□□□ -0.29
HDAC4-205ENST00000454542 C11orf24Q96F05 449 aaPredicted RBP13.26□□□□□ -0.29
HDAC4-205ENST00000454542 HBEGFQ99075 208 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 NPAS2Q99743 824 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 ACPTQ9BZG2 426 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 RNF32Q9H0A6 362 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 EPN3Q9H201 632 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 MID1IP1Q9NPA3 183 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 FBXW2Q9UKT8 454 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 SLC12A4Q9UP95 1085 aa13.26□□□□□ -0.29
HDAC4-205ENST00000454542 NPIPB8E9PQR5 432 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 FGF17O60258 216 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 NPHS1O60500 1241 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms