RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 TMEM19Q96HH6 336 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 DPH7Q9BTV6 452 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 CXorf36Q9H7Y0 433 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 ALPK2Q86TB3 2170 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 M0R3H8 397 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 IGFBP1P08833 259 aaPredicted RBP11.42□□□□□ -0.58
SMPD4-213ENST00000454468 HOXB3P14651 431 aaPredicted RBP11.42□□□□□ -0.58
SMPD4-213ENST00000454468 GPX2P18283 190 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 KRT20P35900 424 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 CDC42P60953 191 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 ERVK-21P61565 698 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 OLR1P78380 273 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 DNASE1L3Q13609 305 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 CDKL4Q5MAI5 379 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 ZNF691Q5VV52 312 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 PNCKQ6P2M8 343 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 BCDIN3DQ7Z5W3 292 aaKnown RBP11.42□□□□□ -0.58
SMPD4-213ENST00000454468 AMER3Q8N944 861 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 KCT2Q8NC54 265 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 OR8J2Q8NGG1 315 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 MCFD2Q8NI22 146 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 CHTF18Q8WVB6 975 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 SMPDL3AQ92484 453 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 HTRA1Q92743 480 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 TMEM203Q969S6 136 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 TAMM41Q96BW9 452 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 ZNF707Q96C28 371 aaPredicted RBP11.42□□□□□ -0.58
SMPD4-213ENST00000454468 CXorf40BQ96DE9 158 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 TOR4AQ9NXH8 423 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 TMEFF2Q9UIK5 374 aaPredicted RBP11.42□□□□□ -0.58
SMPD4-213ENST00000454468 PPIL1Q9Y3C6 166 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 PCM1Q15154 2024 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 NOTCH4Q99466 2003 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 H0Y8X5 98 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 AIREO43918 545 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 C7P10643 843 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 ALOX12P18054 663 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 NTSP30990 170 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 AVPR1BP47901 424 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 SELENOWP63302 87 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 CAMK1Q14012 370 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 INAQ16352 499 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 DGUOKQ16854 277 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 ARMC8Q8IUR7 673 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 TMEFF1Q8IYR6 380 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 IQCF1Q8N6M8 205 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 BORCS5Q969J3 196 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 ASB16Q96NS5 453 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 TMEM184CQ9NVA4 438 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 PAK1IP1Q9NWT1 392 aaPredicted RBP11.42□□□□□ -0.58
SMPD4-213ENST00000454468 MS4A12Q9NXJ0 267 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 GULP1Q9UBP9 304 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 MAFFQ9ULX9 164 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 MAN2B2Q9Y2E5 1009 aa11.42□□□□□ -0.58
SMPD4-213ENST00000454468 TRIOBPQ9H2D6 2365 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 ANHXE9PGG2 379 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 CACNB4O00305 520 aaPredicted RBP11.41□□□□□ -0.58
SMPD4-213ENST00000454468 PCDHGA12O60330 932 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 PRMT3O60678 531 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 HPRP00739 348 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 ITGA2P17301 1181 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 PSMA3P25788 255 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 CLCA4Q14CN2 919 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 SYPL1Q16563 259 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 ATAT1Q5SQI0 421 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 TYW3Q6IPR3 259 aaKnown RBP11.41□□□□□ -0.58
SMPD4-213ENST00000454468 NUDT13Q86X67 352 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 HORMAD2Q8N7B1 307 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 OR2L2Q8NH16 312 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.41□□□□□ -0.58
SMPD4-213ENST00000454468 FNDC11Q9BVV2 318 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 KLHL42Q9P2K6 505 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 EFCAB9A8MZ26 197 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 PLPP1O14494 284 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 GPR37L1O60883 481 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 SERPINI2O75830 405 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 DLGAP3O95886 979 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 FURINP09958 794 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 CISD3P0C7P0 127 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 OPRL1P41146 370 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 BTN3A2P78410 334 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 TIGD6Q17RP2 521 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 DCST1Q5T197 706 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 KHDRBS2Q5VWX1 349 aaKnown RBP11.41□□□□□ -0.58
SMPD4-213ENST00000454468 OXR1Q8N573 874 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 LMLNQ96KR4 655 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 INSM2Q96T92 566 aaPredicted RBP11.41□□□□□ -0.58
SMPD4-213ENST00000454468 MAGIXQ9H6Y5 334 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 GIMAP4Q9NUV9 329 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 TRNAU1APQ9NX07 287 aaKnown RBP11.41□□□□□ -0.58
SMPD4-213ENST00000454468 DOCK9Q9BZ29 2069 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 PLXNA3P51805 1871 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 ZW10O43264 779 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 LCMT2O60294 686 aaKnown RBP11.41□□□□□ -0.58
SMPD4-213ENST00000454468 GSTM2P28161 218 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 S100A5P33763 92 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 DCDC1P59894 354 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 ST3GAL4Q11206 333 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 SLAMF1Q13291 335 aa11.41□□□□□ -0.58
SMPD4-213ENST00000454468 IRF4Q15306 451 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms