RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 JUPP14923 745 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 OR3A3P47888 321 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 GALK2Q01415 458 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 RING1Q06587 406 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 GPR33Q49SQ1 333 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 FUT10Q6P4F1 479 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 FAHD1Q6P587 224 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 CNIH2Q6PI25 160 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 ZNF557Q8N988 423 aaPredicted RBP13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 ZSCAN5AQ9BUG6 496 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 MKRN2Q9H000 416 aaKnown RBP13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 GABARAPL1Q9H0R8 117 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 PDFQ9HBH1 243 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 ALG5Q9Y673 324 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 LRRTM2O43300 516 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 STC2O76061 302 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 DDX5P17844 614 aaKnown RBP13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 PTX3P26022 381 aaPredicted RBP13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 PTGS2P35354 604 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 DCDC1P59894 354 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 DSTNP60981 165 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 SLBPQ14493 270 aaKnown RBP eCLIP13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 GPR19Q15760 415 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 MED27Q6P2C8 311 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 HUS1BQ8NHY5 278 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 ZNF431Q8TF32 576 aaPredicted RBP13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 ARMC5Q96C12 935 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 TEX12Q9BXU0 123 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 ADAM30Q9UKF2 790 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 A3GALT2U3KPV4 340 aa13.27□□□□□ -0.29
UBE2D3-210ENST00000453744 H1F0P07305 194 aaKnown RBP13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 AOAHP28039 575 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 PTSQ03393 145 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 FAPQ12884 760 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 KLHL12Q53G59 568 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 SLX4IPQ5VYV7 408 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 SLC24A5Q71RS6 500 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 ZNF683Q8IZ20 524 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 SETD6Q8TBK2 473 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 UFD1Q92890 307 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 EID2BQ96D98 161 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 GALNT9Q9HCQ5 603 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 TRBV4-1A0A0J9YWV2 114 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 C2orf92A0A1B0GVN3 265 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 ERAL1O75616 437 aaKnown RBP13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 IRF3Q14653 427 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 CLPPQ16740 277 aaPredicted RBP13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 FLYWCH1Q4VC44 716 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 PDZD3Q86UT5 571 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 PIGKQ92643 395 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 SLX1AQ9BQ83 275 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 CACYBPQ9HB71 228 aaKnown RBP13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 KIAA0100Q14667 2235 aaKnown RBP13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 NPIPB15A6NHN6 443 aaPredicted RBP13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 H7C4K7 107 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 HPGDSO60760 199 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 ZNF623O75123 536 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 DHFRP00374 187 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 SDHBP21912 280 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 PTGER1P34995 402 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 P2RX3P56373 397 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 ZNF91Q05481 1191 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 PIN1Q13526 163 aaPredicted RBP13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 LRRC32Q14392 662 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 MZT2AQ6P582 158 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 OTOP2Q7RTS6 562 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 MRPS31Q92665 395 aaKnown RBP13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 UPF1Q92900 1129 aaKnown RBP eCLIP13.26□□□□□ -0.299e-15■■□□□ 12.1
UBE2D3-210ENST00000453744 PITX2Q99697 317 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 BTBD2Q9BX70 525 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 CHIAQ9BZP6 476 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.26□□□□□ -0.298e-9■■□□□ 13.6
UBE2D3-210ENST00000453744 LINC00597Q9H2U6 94 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 IL20RAQ9UHF4 553 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 PCDHGA2Q9Y5H1 932 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 SNX11Q9Y5W9 270 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 CFAP20Q9Y6A4 193 aaKnown RBP13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 THSD7AQ9UPZ6 1657 aa13.26□□□□□ -0.29
UBE2D3-210ENST00000453744 CD8B2A6NJW9 211 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 RGS13O14921 159 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 CSO75390 466 aaKnown RBP13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 CD8BP10966 210 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 SNRPD1P62314 119 aaKnown RBP13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 RPL6Q02878 288 aaKnown RBP13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 GPR50Q13585 617 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 SLC5A12Q1EHB4 618 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 FAM109AQ8N4B1 249 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 TEX47Q8TBZ9 253 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 TEFMQ96QE5 360 aaKnown RBP13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 ENPP4Q9Y6X5 453 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 TRBV5-3A0A0A0MS03 114 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 B4DXG7 233 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 RTCAO00442 366 aaKnown RBP13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 STATHP02808 62 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 ALPPL2P10696 532 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 CBLP22681 906 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 SLC9A3P48764 834 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 MRPL19P49406 292 aaKnown RBP13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 HNMTP50135 292 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms