RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 NUDT7P0C024 238 aa10.21□□□□□ -0.78
PKP4-206ENST00000452162 PCGF2P35227 344 aa10.21□□□□□ -0.78
PKP4-206ENST00000452162 RPL3P39023 403 aaKnown RBP10.21□□□□□ -0.78
PKP4-206ENST00000452162 MVDP53602 400 aa10.21□□□□□ -0.78
PKP4-206ENST00000452162 LIMK1P53667 647 aa10.21□□□□□ -0.78
PKP4-206ENST00000452162 TAS2R50P59544 299 aa10.21□□□□□ -0.78
PKP4-206ENST00000452162 REEP5Q00765 189 aa10.21□□□□□ -0.78
PKP4-206ENST00000452162 C2orf80Q0P641 193 aa10.21□□□□□ -0.78
PKP4-206ENST00000452162 BNIP3Q12983 259 aa10.21□□□□□ -0.78
PKP4-206ENST00000452162 EIF2B5Q13144 721 aaKnown RBP10.21□□□□□ -0.78
PKP4-206ENST00000452162 SPIDRQ14159 915 aa10.21□□□□□ -0.78
PKP4-206ENST00000452162 RBBP5Q15291 538 aaKnown RBP10.21□□□□□ -0.78
PKP4-206ENST00000452162 RSPO4Q2I0M5 234 aaPredicted RBP10.21□□□□□ -0.78
PKP4-206ENST00000452162 PRSS53Q2L4Q9 553 aa10.21□□□□□ -0.78
PKP4-206ENST00000452162 SLC30A9Q6PML9 568 aa10.21□□□□□ -0.78
PKP4-206ENST00000452162 IKBIPQ70UQ0 350 aa10.21□□□□□ -0.78
PKP4-206ENST00000452162 DCP2Q8IU60 420 aaKnown RBP10.21□□□□□ -0.78
PKP4-206ENST00000452162 ABHD11Q8NFV4 315 aa10.21□□□□□ -0.78
PKP4-206ENST00000452162 ZFAND2BQ8WV99 257 aa10.21□□□□□ -0.78
PKP4-206ENST00000452162 SMPDL3AQ92484 453 aa10.21□□□□□ -0.78
PKP4-206ENST00000452162 PPCDCQ96CD2 204 aa10.21□□□□□ -0.78
PKP4-206ENST00000452162 MTERF3Q96E29 417 aa10.21□□□□□ -0.78
PKP4-206ENST00000452162 MUS81Q96NY9 551 aa10.21□□□□□ -0.78
PKP4-206ENST00000452162 AMBRA1Q9C0C7 1298 aa10.21□□□□□ -0.78
PKP4-206ENST00000452162 ERVMER34-1Q9H9K5 563 aa10.21□□□□□ -0.78
PKP4-206ENST00000452162 CUEDC1Q9NWM3 386 aaPredicted RBP10.21□□□□□ -0.78
PKP4-206ENST00000452162 ABCG2Q9UNQ0 655 aa10.21□□□□□ -0.78
PKP4-206ENST00000452162 CEPT1Q9Y6K0 416 aa10.21□□□□□ -0.78
PKP4-206ENST00000452162 A0A1B0GTQ1 180 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 NOBOXO60393 691 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 SEMA3DO95025 777 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 C6orf47O95873 294 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 ACP5P13686 325 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 PSMB5P28074 263 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 TPP2P29144 1249 aaPredicted RBP10.2□□□□□ -0.78
PKP4-206ENST00000452162 CRYBA2P53672 197 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 HBA1P69905 142 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 EPS8Q12929 822 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 PPP1R8Q12972 351 aaKnown RBP10.2□□□□□ -0.78
PKP4-206ENST00000452162 BIRC2Q13490 618 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 NFATC4Q14934 902 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 PLCL1Q15111 1095 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.2□□□□□ -0.782e-7■■□□□ 14.2
PKP4-206ENST00000452162 CCNYL2Q5T2Q4 361 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 SHQ1Q6PI26 577 aaKnown RBP10.2□□□□□ -0.78
PKP4-206ENST00000452162 ENPP7Q6UWV6 458 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 GATAD2AQ86YP4 633 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 HIPK1Q86Z02 1210 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 ANKRD53Q8N9V6 530 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 CIDECQ96AQ7 238 aaPredicted RBP10.2□□□□□ -0.78
PKP4-206ENST00000452162 TMIGD2Q96BF3 282 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 INSM2Q96T92 566 aaPredicted RBP10.2□□□□□ -0.78
PKP4-206ENST00000452162 TIMM29Q9BSF4 260 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 SORBS1Q9BX66 1292 aaKnown RBP10.2□□□□□ -0.78
PKP4-206ENST00000452162 MS4A8Q9BY19 250 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 ZNF717Q9BY31 904 aaPredicted RBP10.2□□□□□ -0.78
PKP4-206ENST00000452162 TRIM4Q9C037 500 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 PCBD2Q9H0N5 130 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 GABARAPL1Q9H0R8 117 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 SLC24A3Q9HC58 644 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 GPATCH2Q9NW75 528 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 FAM118AQ9NWS6 357 aa10.2□□□□□ -0.78
PKP4-206ENST00000452162 NUP214P35658 2090 aaPredicted RBP10.2□□□□□ -0.78
PKP4-206ENST00000452162 PLPP1O14494 284 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 SDC3O75056 442 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 E2F6O75461 281 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 CEACAM5P06731 702 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 IL3P08700 152 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 CD59P13987 128 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 RXRGP48443 463 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 CCR8P51685 355 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 CHST15Q7LFX5 561 aaPredicted RBP10.19□□□□□ -0.78
PKP4-206ENST00000452162 VTCN1Q7Z7D3 282 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 PARGQ86W56 976 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 NAGSQ8N159 534 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 LINC01555Q8NAE3 123 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 TSACCQ96A04 125 aaPredicted RBP10.19□□□□□ -0.78
PKP4-206ENST00000452162 NMD3Q96D46 503 aaKnown RBP10.19□□□□□ -0.78
PKP4-206ENST00000452162 HSH2DQ96JZ2 352 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 AIF1LQ9BQI0 150 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 TCEAL2Q9H3H9 227 aaPredicted RBP10.19□□□□□ -0.78
PKP4-206ENST00000452162 NT5DC2Q9H857 520 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 PTTG2Q9NZH5 202 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 IFT80Q9P2H3 777 aaPredicted RBP10.19□□□□□ -0.78
PKP4-206ENST00000452162 TMEFF2Q9UIK5 374 aaPredicted RBP10.19□□□□□ -0.78
PKP4-206ENST00000452162 CDV3Q9UKY7 258 aaKnown RBP10.19□□□□□ -0.78
PKP4-206ENST00000452162 SLC17A4Q9Y2C5 497 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 AP1M2Q9Y6Q5 423 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 TMEM229AB2RXF0 380 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 CACNB4O00305 520 aaPredicted RBP10.19□□□□□ -0.78
PKP4-206ENST00000452162 TOR1BO14657 336 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 SLC30A4O14863 429 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 SCAMP1O15126 338 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 TNFRSF21O75509 655 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 NTRK1P04629 796 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 ZNF883P0CG24 379 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 CDH2P19022 906 aaPredicted RBP10.19□□□□□ -0.78
PKP4-206ENST00000452162 PRKACGP22612 351 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 CXCR2P25025 360 aa10.19□□□□□ -0.78
PKP4-206ENST00000452162 SERPINB1P30740 379 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms